Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 RNU1-24P-201ENST00000364285 165 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 SUGT1P2-201ENST00000379452 992 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AC093719.1-202ENST00000392735 373 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 RPL23AP59-201ENST00000399415 461 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 HMGB3P31-201ENST00000413333 595 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 UBTFL3-201ENST00000418934 1024 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 Z97055.1-201ENST00000419730 712 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX4Q06945 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX4Q06945 AL662791.1-201ENST00000441992 928 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 NANOGNBP1-201ENST00000448444 480 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX4Q06945 Z83838.1-202ENST00000456225 839 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 CDC42P1-201ENST00000456658 548 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC079382.1-201ENST00000493346 557 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
SOX4Q06945 SNX18P24-201ENST00000505249 671 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 OR4D12P-201ENST00000509361 911 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SOX4Q06945 PRELID3BP4-201ENST00000515476 571 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 COX6B1P4-201ENST00000519826 484 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX4Q06945 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX4Q06945 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX4Q06945 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX4Q06945 MIR4701-201ENST00000583094 63 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AC112220.3-201ENST00000605502 502 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 AL080312.2-201ENST00000613001 630 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AL445647.2-201ENST00000615170 130 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AL357080.1-201ENST00000617394 239 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AC009704.2-201ENST00000618739 483 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 AF001550.2-201ENST00000636643 217 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC073055.1-201ENST00000456901 1621 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SOX4Q06945 AC022507.1-201ENST00000548349 1505 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 AC092821.3-202ENST00000641304 2767 ntBASIC6.85□□□□□ -1.31
SOX4Q06945 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX4Q06945 AC125238.2-201ENST00000430003 1440 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC011455.2-201ENST00000599320 3336 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SOX4Q06945 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 SAMM50P1-201ENST00000455403 1399 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SOX4Q06945 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX4Q06945 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 OR10J6P-201ENST00000289731 930 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SOX4Q06945 STAG3L4-201ENST00000352103 530 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 RNA5SP110-201ENST00000362638 115 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SOX4Q06945 SNORD115-47-201ENST00000391226 86 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC008171.1-201ENST00000395058 200 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 SNORA11.3-201ENST00000408471 128 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX4Q06945 RPL21P108-201ENST00000413857 481 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 NENFP1-201ENST00000419476 466 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX4Q06945 AC009480.2-201ENST00000422916 432 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 GTF2IP23-201ENST00000423746 351 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 PSMD10P2-201ENST00000432890 672 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AL035458.1-201ENST00000433096 585 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 MTND3P21-201ENST00000433774 331 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX4Q06945 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 RPL5P7-201ENST00000444235 813 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 FAR2P1-206ENST00000449736 709 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX4Q06945 RPL12P30-201ENST00000488389 499 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms