Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC011626.1-201ENST00000604710 562 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC018695.5-201ENST00000605872 315 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC097505.1-201ENST00000610199 565 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 MIR8069-1-201ENST00000616627 86 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 MIR8069-2-201ENST00000621412 86 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC127024.6-201ENST00000621598 424 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 MIR8080-201ENST00000622224 89 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 OR10J6P-201ENST00000289731 930 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 RNU1-77P-201ENST00000390868 162 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 ATP5F1P2-201ENST00000398143 760 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 OR4K12P-201ENST00000406538 961 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AL512430.2-201ENST00000406786 339 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AL133325.1-201ENST00000421090 382 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 DSTNP5-201ENST00000427921 523 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 FAM96AP1-201ENST00000430879 482 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 CYCSP6-201ENST00000434498 302 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC239798.3-201ENST00000454459 408 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC105031.1-201ENST00000518550 476 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 RN7SL176P-201ENST00000580352 264 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AC010245.2-201ENST00000606908 1167 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 SAMMSON-209ENST00000641222 1100 ntBASIC3.93□□□□□ -1.78
HIST1H1AQ02539 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
HIST1H1AQ02539 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC015813.6-201ENST00000624409 5808 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC112255.1-201ENST00000624070 2493 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNU1-94P-201ENST00000362627 173 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNA5SP335-201ENST00000363817 110 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNA5SP234-201ENST00000363916 119 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RN7SKP124-201ENST00000364730 341 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNU1-149P-201ENST00000390870 161 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 OR8V1P-201ENST00000395193 873 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RAB5CP1-201ENST00000395972 580 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNA5SP178-201ENST00000410380 128 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC002069.1-201ENST00000429649 1159 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC012075.1-201ENST00000436549 580 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RPL35AP21-201ENST00000437667 333 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 NOP56P2-201ENST00000447491 769 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 MRPL35P2-201ENST00000448009 511 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RNU7-157P-201ENST00000459600 66 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 AC091180.1-201ENST00000462104 372 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RPL7AP28-201ENST00000464513 571 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 RPL35AP19-201ENST00000469425 329 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 EIF1P7-201ENST00000487533 337 ntBASIC3.92□□□□□ -1.78
HIST1H1AQ02539 B4GALNT2P1-201ENST00000508857 307 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms