Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 SNORD16-201ENST00000362803 99 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 Y_RNA.465-201ENST00000384293 102 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 RNU6-83P-201ENST00000384568 112 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC114814.2-201ENST00000419195 485 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC066692.1-201ENST00000421721 457 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AL157884.1-201ENST00000424561 454 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 COX7BP2-201ENST00000437976 242 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC104978.1-201ENST00000449387 391 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 RPL31P15-201ENST00000449770 338 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.52□□□□□ -1.53
NKX6-1P78426 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
NKX6-1P78426 CR383656.1-201ENST00000484916 377 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 RPS3AP22-201ENST00000488297 769 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 RPL12P30-201ENST00000488389 499 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AL035404.1-201ENST00000497982 568 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC091965.3-201ENST00000506236 208 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC093815.1-201ENST00000508637 280 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 HMGB1P23-201ENST00000518743 568 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.52□□□□□ -1.53
NKX6-1P78426 C1GALT1P3-201ENST00000522049 819 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AP003461.1-201ENST00000528866 78 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC125611.1-201ENST00000549563 229 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.52□□□□□ -1.53
NKX6-1P78426 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AL132657.2-201ENST00000564417 358 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC083837.1-201ENST00000565297 2994 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 Z94722.1-201ENST00000604328 474 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC097467.4-201ENST00000605504 141 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC092681.3-201ENST00000609463 678 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AP000255.1-201ENST00000610276 676 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AC129778.1-202ENST00000623812 261 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AL591379.1-207ENST00000635982 261 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 AP003399.1-201ENST00000637534 361 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 SAMMSON-209ENST00000641222 1100 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
NKX6-1P78426 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX6-1P78426 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX6-1P78426 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX6-1P78426 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.51□□□□□ -1.53
NKX6-1P78426 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 AL442128.2-201ENST00000620246 1824 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 AC015799.1-201ENST00000622996 3122 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 SMG1P7-201ENST00000565246 2704 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 RARSP1-201ENST00000542842 1418 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX6-1P78426 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX6-1P78426 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX6-1P78426 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NKX6-1P78426 MIR323A-201ENST00000362199 86 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 CHEK2P5-201ENST00000423877 246 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 RPL12P12-201ENST00000424633 501 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 IGLV3-4-201ENST00000432300 244 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX6-1P78426 AL031663.1-201ENST00000437445 219 ntBASIC5.51□□□□□ -1.53
NKX6-1P78426 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX6-1P78426 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.51□□□□□ -1.53
NKX6-1P78426 RPS7P5-201ENST00000441482 581 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms