Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 RANP1-206ENST00000455094 651 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 RPL5P13-201ENST00000462840 709 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 RPL35AP19-201ENST00000469425 329 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AC011411.1-201ENST00000509592 876 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN20P56880 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN20P56880 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CLDN20P56880 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN20P56880 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
CLDN20P56880 DUX4L52-201ENST00000549363 777 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC025918.2-201ENST00000558683 763 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN20P56880 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN20P56880 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN20P56880 MIR6768-201ENST00000610734 72 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AL158062.1-201ENST00000619632 745 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AC006206.1-201ENST00000544842 3387 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN20P56880 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN20P56880 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 AL359715.4-201ENST00000606629 1436 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 AL121886.1-201ENST00000358609 435 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 RN7SKP74-201ENST00000362849 309 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 TATDN1P1-201ENST00000414123 891 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 PTP4A1P1-201ENST00000420539 515 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 MTND4LP13-201ENST00000425022 298 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 OR6D1P-201ENST00000436165 939 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 NANOGP9-201ENST00000439890 892 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 AL596266.1-201ENST00000448132 400 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 HMGN1P5-201ENST00000448591 263 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.01□□□□□ -1.61
CLDN20P56880 CLIC4P1-201ENST00000453177 535 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 SNORD125-201ENST00000459538 96 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC018638.3-201ENST00000461273 132 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 RPL7L1P4-201ENST00000513004 707 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 RN7SKP253-201ENST00000516424 309 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 SCARNA1-201ENST00000517138 166 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN20P56880 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 NMNAT1P5-201ENST00000559657 841 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC015720.2-201ENST00000567709 334 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 MIR4472-2-201ENST00000582069 67 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 CBX3P2-202ENST00000583365 535 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC090330.1-201ENST00000588646 764 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN20P56880 AF230666.2-201ENST00000602328 725 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AF129408.1-201ENST00000608767 431 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC019131.2-201ENST00000609071 870 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 MIR6886-201ENST00000619864 61 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC009269.6-201ENST00000621778 588 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC090772.4-201ENST00000623599 362 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 AC132068.1-201ENST00000623805 459 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN20P56880 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 MTCO1P11-201ENST00000429111 1528 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CLDN20P56880 GVINP1-202ENST00000531871 7271 ntBASIC5.01□□□□□ -1.61
CLDN20P56880 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN20P56880 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN20P56880 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5□□□□□ -1.61
CLDN20P56880 PROS2P-201ENST00000474651 1951 ntBASIC5□□□□□ -1.61
CLDN20P56880 MT-RNR2-201ENST00000387347 1559 ntBASIC5□□□□□ -1.61
CLDN20P56880 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms