Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC044810.1-201ENST00000480271 711 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RPS27P23-201ENST00000487608 251 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RPL7P38-201ENST00000488396 739 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RPS4XP15-201ENST00000489210 795 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC093664.1-201ENST00000511779 289 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RNU6-1178P-201ENST00000516674 107 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC008429.2-201ENST00000523057 864 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AP001000.1-201ENST00000526843 742 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.95□□□□□ -1.46
GFRA1P56159 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 OR6C7P-201ENST00000547875 934 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AL162632.2-201ENST00000553933 399 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC037479.1-201ENST00000558361 625 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC090888.3-201ENST00000558917 509 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC087481.2-201ENST00000565492 330 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 AP002360.4-201ENST00000606980 481 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC024560.3-201ENST00000608482 349 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 MIR6889-201ENST00000613185 59 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AL031651.1-201ENST00000615357 1438 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 uc_338.9-201ENST00000617424 182 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AL357562.1-201ENST00000624911 609 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC083806.2-201ENST00000617795 2685 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 CLCA3P-203ENST00000490028 2781 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 CR383658.2-201ENST00000547576 1525 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GFRA1P56159 RPL21P132-201ENST00000331267 462 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 RPL11P4-201ENST00000332269 436 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 FGF7P2-201ENST00000332473 296 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GFRA1P56159 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GFRA1P56159 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 AC136624.1-201ENST00000400791 413 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AL139098.1-201ENST00000407291 389 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 RPS7P13-201ENST00000413955 498 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC093698.1-201ENST00000423843 571 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC073069.1-201ENST00000428657 441 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 UBE2FP3-201ENST00000436366 524 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 COX6CP12-201ENST00000446748 202 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA1P56159 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA1P56159 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC098818.1-201ENST00000478593 252 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 ARL2BPP4-201ENST00000506854 471 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC108471.1-201ENST00000513977 287 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC116347.2-201ENST00000514912 523 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 RN7SKP283-201ENST00000517197 270 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC008802.1-201ENST00000519121 791 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC116917.1-201ENST00000520558 305 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA1P56159 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GFRA1P56159 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC087883.1-201ENST00000551882 391 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA1P56159 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 AC092650.2-201ENST00000619984 902 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms