Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 ZNF603P-201ENST00000405613 487 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 VDAC1P9-201ENST00000412766 841 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 LINC00993-201ENST00000420453 540 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 BX284632.2-201ENST00000421091 399 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 MAPRE1P3-201ENST00000435438 796 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AL512605.1-202ENST00000441919 381 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AL359955.2-201ENST00000445380 353 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 CST12P-201ENST00000457644 362 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.88□□□□□ -1.63
GTF2A1P52655 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 RN7SL583P-201ENST00000475692 287 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 PRMT5P1-201ENST00000514351 598 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 RNA5SP340-201ENST00000517132 107 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC100770.1-201ENST00000532310 322 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC092851.1-201ENST00000535964 478 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AP006289.1-201ENST00000538089 277 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC135001.1-201ENST00000544546 283 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC107016.1-201ENST00000550463 337 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC124916.2-201ENST00000604416 224 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC092266.1-201ENST00000610958 165 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 MIR6793-201ENST00000612376 63 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC245014.3-201ENST00000618589 347 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC007204.1-201ENST00000621794 555 ntBASIC4.88□□□□□ -1.63
GTF2A1P52655 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
GTF2A1P52655 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.88□□□□□ -1.63
GTF2A1P52655 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF2A1P52655 AP001002.1-201ENST00000625148 1513 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 MT-RNR2-201ENST00000387347 1559 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GTF2A1P52655 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GTF2A1P52655 SNORA70-201ENST00000384436 135 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 AC007161.1-204ENST00000423039 460 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 MTND2P11-201ENST00000423638 648 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 PNKDP1-201ENST00000435914 430 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.87□□□□□ -1.63
GTF2A1P52655 VN1R110P-201ENST00000438988 971 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 AL359839.1-201ENST00000451975 1160 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 SYT14P1-201ENST00000481459 721 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 SNRPCP11-201ENST00000492453 205 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 RN7SKP99-201ENST00000517028 307 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 HMGN2P36-201ENST00000529541 409 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 RFPL1S-203ENST00000539579 330 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.87□□□□□ -1.63
GTF2A1P52655 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.87□□□□□ -1.63
GTF2A1P52655 RN7SL230P-201ENST00000580835 303 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF2A1P52655 AC020914.4-201ENST00000597690 277 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AP000769.2-201ENST00000602344 396 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 AC011626.1-201ENST00000604710 562 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 FAM27E4-201ENST00000605259 342 ntBASIC4.87□□□□□ -1.63
GTF2A1P52655 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GTF2A1P52655 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF2A1P52655 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF2A1P52655 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms