Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.11□□□□□ -1.27
USP11P51784 BNIP3P33-201ENST00000598912 569 ntBASIC7.11□□□□□ -1.27
USP11P51784 U73023.1-201ENST00000603134 700 ntBASIC7.11□□□□□ -1.27
USP11P51784 AL392112.1-201ENST00000605115 829 ntBASIC7.11□□□□□ -1.27
USP11P51784 AL591167.1-201ENST00000607321 456 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC007038.2-201ENST00000608095 740 ntBASIC7.11□□□□□ -1.27
USP11P51784 AP003789.1-201ENST00000617737 605 ntBASIC7.11□□□□□ -1.27
USP11P51784 MIR6806-201ENST00000622141 64 ntBASIC7.11□□□□□ -1.27
USP11P51784 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 NCOA4P2-201ENST00000340589 1813 ntBASIC7.11□□□□□ -1.27
USP11P51784 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
USP11P51784 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 PDZK1P1-202ENST00000425209 1350 ntBASIC7.1□□□□□ -1.27
USP11P51784 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 RNU6-1331P-201ENST00000363658 106 ntBASIC7.1□□□□□ -1.27
USP11P51784 RNU1-87P-201ENST00000363727 170 ntBASIC7.1□□□□□ -1.27
USP11P51784 RNA5SP279-201ENST00000365513 117 ntBASIC7.1□□□□□ -1.27
USP11P51784 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
USP11P51784 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.1□□□□□ -1.27
USP11P51784 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 OR4K6P-201ENST00000416478 897 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 Z75741.2-201ENST00000417272 1167 ntBASIC7.1□□□□□ -1.27
USP11P51784 RPL7P30-201ENST00000420888 709 ntBASIC7.1□□□□□ -1.27
USP11P51784 IPPKP1-201ENST00000422501 768 ntBASIC7.1□□□□□ -1.27
USP11P51784 RPL7AP14-201ENST00000424041 802 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC104651.1-201ENST00000427559 735 ntBASIC7.1□□□□□ -1.27
USP11P51784 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 RPSAP65-201ENST00000429660 595 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC010240.2-201ENST00000445363 1205 ntBASIC7.1□□□□□ -1.27
USP11P51784 WASF1P1-201ENST00000447560 1131 ntBASIC7.1□□□□□ -1.27
USP11P51784 CYCSP42-201ENST00000450823 238 ntBASIC7.1□□□□□ -1.27
USP11P51784 HMGB1P7-201ENST00000450921 612 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC092001.1-201ENST00000453012 261 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC118758.1-202ENST00000454719 225 ntBASIC7.1□□□□□ -1.27
USP11P51784 RPL7P32-201ENST00000457119 744 ntBASIC7.1□□□□□ -1.27
USP11P51784 AMD1P1-201ENST00000457220 922 ntBASIC7.1□□□□□ -1.27
USP11P51784 MARK2P8-201ENST00000476069 952 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.1□□□□□ -1.27
USP11P51784 AC114781.4-201ENST00000513707 639 ntBASIC7.1□□□□□ -1.27
USP11P51784 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.1□□□□□ -1.27
USP11P51784 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.1□□□□□ -1.27
USP11P51784 OR8Q1P-201ENST00000526467 655 ntBASIC7.1□□□□□ -1.27
USP11P51784 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 OR4A43P-201ENST00000532938 908 ntBASIC7.1□□□□□ -1.27
USP11P51784 RPA2P3-201ENST00000533268 770 ntBASIC7.1□□□□□ -1.27
USP11P51784 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.1□□□□□ -1.27
USP11P51784 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.1□□□□□ -1.27
USP11P51784 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 AL121579.1-201ENST00000555129 305 ntBASIC7.1□□□□□ -1.27
USP11P51784 MIR3154-201ENST00000577829 84 ntBASIC7.1□□□□□ -1.27
USP11P51784 MIR3189-201ENST00000578735 73 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 MIR4701-201ENST00000583094 63 ntBASIC7.1□□□□□ -1.27
USP11P51784 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 AP001823.1-201ENST00000604056 1003 ntBASIC7.1□□□□□ -1.27
USP11P51784 LSM1P2-201ENST00000604911 322 ntBASIC7.1□□□□□ -1.27
USP11P51784 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 AC005840.5-201ENST00000619166 599 ntBASIC7.1□□□□□ -1.27
USP11P51784 AL683826.1-201ENST00000624104 627 ntBASIC7.1□□□□□ -1.27
USP11P51784 SEPT14P19-203ENST00000633205 211 ntBASIC7.1□□□□□ -1.27
USP11P51784 OR5AK4P-201ENST00000635912 903 ntBASIC7.1□□□□□ -1.27
USP11P51784 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
USP11P51784 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USP11P51784 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
USP11P51784 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
USP11P51784 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
USP11P51784 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 AC092692.1-201ENST00000623625 2595 ntBASIC7.09□□□□□ -1.27
USP11P51784 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USP11P51784 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
USP11P51784 AL672167.1-206ENST00000356293 943 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms