Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CUBNP2-201ENST00000443534 1139 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AC069540.1-201ENST00000446320 988 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AC099063.2-201ENST00000446360 662 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 RPL31P15-201ENST00000449770 338 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 SDC4P-201ENST00000453285 601 ntBASIC4.6□□□□□ -1.67
CDX1P47902 RPL12P39-201ENST00000455456 496 ntBASIC4.6□□□□□ -1.67
CDX1P47902 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 RN7SL205P-201ENST00000490174 284 ntBASIC4.6□□□□□ -1.67
CDX1P47902 RN7SL57P-201ENST00000493687 290 ntBASIC4.6□□□□□ -1.67
CDX1P47902 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 SNORD46.2-201ENST00000516021 102 ntBASIC4.6□□□□□ -1.67
CDX1P47902 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDX1P47902 IGKV2D-10-201ENST00000520194 281 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 AC113192.3-201ENST00000529152 742 ntBASIC4.6□□□□□ -1.67
CDX1P47902 UBTFL9-201ENST00000534504 1148 ntBASIC4.6□□□□□ -1.67
CDX1P47902 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 CR383656.14-201ENST00000551951 406 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CDX1P47902 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.6□□□□□ -1.67
CDX1P47902 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.6□□□□□ -1.67
CDX1P47902 AC008521.2-201ENST00000591021 259 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.6□□□□□ -1.67
CDX1P47902 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 AL137072.1-201ENST00000603444 466 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AC018618.2-201ENST00000604770 446 ntBASIC4.6□□□□□ -1.67
CDX1P47902 FAM27E4-201ENST00000605259 342 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AL133481.2-203ENST00000607558 139 ntBASIC4.6□□□□□ -1.67
CDX1P47902 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDX1P47902 AL445670.1-201ENST00000618889 801 ntBASIC4.6□□□□□ -1.67
CDX1P47902 AP002967.1-201ENST00000624203 539 ntBASIC4.6□□□□□ -1.67
CDX1P47902 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDX1P47902 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDX1P47902 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 AC004817.4-201ENST00000602396 3625 ntBASIC4.6□□□□□ -1.67
CDX1P47902 MTND5P11-201ENST00000511037 1812 ntBASIC4.6□□□□□ -1.67
CDX1P47902 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CDX1P47902 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDX1P47902 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDX1P47902 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 RNA5SP211-201ENST00000365516 117 ntBASIC4.59□□□□□ -1.67
CDX1P47902 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 AC092642.1-201ENST00000392417 425 ntBASIC4.59□□□□□ -1.67
CDX1P47902 ATP5F1P6-201ENST00000402768 767 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 RPS4XP5-201ENST00000419038 768 ntBASIC4.59□□□□□ -1.67
CDX1P47902 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.59□□□□□ -1.67
CDX1P47902 AK4P4-201ENST00000419465 646 ntBASIC4.59□□□□□ -1.67
CDX1P47902 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 AC104843.2-201ENST00000427666 297 ntBASIC4.59□□□□□ -1.67
CDX1P47902 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 AC126120.1-201ENST00000431082 470 ntBASIC4.59□□□□□ -1.67
CDX1P47902 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.59□□□□□ -1.67
CDX1P47902 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 AC242426.1-201ENST00000435270 960 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC092447.2-201ENST00000435487 669 ntBASIC4.59□□□□□ -1.67
CDX1P47902 PCBP2P1-201ENST00000437262 977 ntBASIC4.59□□□□□ -1.67
CDX1P47902 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.59□□□□□ -1.67
CDX1P47902 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.59□□□□□ -1.67
CDX1P47902 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 AC073109.1-201ENST00000445066 978 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 FRG2FP-204ENST00000453982 852 ntBASIC4.59□□□□□ -1.67
CDX1P47902 EIF2S2P5-201ENST00000457635 968 ntBASIC4.59□□□□□ -1.67
CDX1P47902 NXT1P1-201ENST00000458481 316 ntBASIC4.59□□□□□ -1.67
CDX1P47902 RPL21P6-201ENST00000479171 504 ntBASIC4.59□□□□□ -1.67
CDX1P47902 PPIAP19-201ENST00000486414 492 ntBASIC4.59□□□□□ -1.67
CDX1P47902 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 RPL7P51-201ENST00000490532 749 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC093311.1-201ENST00000506586 2021 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC106872.5-201ENST00000508856 1416 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC114781.3-201ENST00000512083 142 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 IGKV2-4-201ENST00000523070 340 ntBASIC4.59□□□□□ -1.67
CDX1P47902 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.59□□□□□ -1.67
CDX1P47902 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.59□□□□□ -1.67
CDX1P47902 AC006530.1-201ENST00000555980 571 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms