Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.83□□□□□ -1.48
NEDD4P46934 AC131971.1-201ENST00000332881 1482 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 AC025574.1-201ENST00000554784 1653 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 BX284613.1-201ENST00000452221 1641 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 TET1P1-201ENST00000426627 2301 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD4P46934 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.82□□□□□ -1.48
NEDD4P46934 COX6B1P1-201ENST00000415962 213 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 AL590399.4-201ENST00000436561 601 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 AC012512.1-201ENST00000446594 718 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AL356981.1-201ENST00000454879 684 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 RPL23AP56-201ENST00000460778 453 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 RPS3AP41-201ENST00000462701 778 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD4P46934 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD4P46934 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.82□□□□□ -1.48
NEDD4P46934 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD4P46934 AC009117.1-201ENST00000563948 554 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.82□□□□□ -1.48
NEDD4P46934 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 AC115989.2-201ENST00000578640 563 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AL049794.2-201ENST00000616301 365 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 AC009120.7-201ENST00000623452 780 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 AC009643.2-201ENST00000603543 1448 ntBASIC5.82□□□□□ -1.48
NEDD4P46934 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.82□□□□□ -1.48
NEDD4P46934 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.82□□□□□ -1.48
NEDD4P46934 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NEDD4P46934 ZNF652P1-201ENST00000442420 1309 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 HMGB3P7-201ENST00000400214 611 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 Z97832.1-201ENST00000402490 328 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AL021331.1-201ENST00000402817 582 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD4P46934 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD4P46934 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD4P46934 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 VN1R54P-201ENST00000435210 1049 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 MRPL35P2-201ENST00000448009 511 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 AC116562.1-201ENST00000485355 781 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 COX6B1P2-201ENST00000489624 230 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 HMGB3P14-201ENST00000494195 599 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.81□□□□□ -1.48
NEDD4P46934 AP001922.4-201ENST00000526967 290 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AP005901.4-201ENST00000577336 569 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AC020910.3-201ENST00000603701 874 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 AC019206.1-201ENST00000621938 425 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD4P46934 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
NEDD4P46934 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 AC099654.2-201ENST00000433031 1980 ntBASIC5.81□□□□□ -1.48
NEDD4P46934 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD4P46934 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD4P46934 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NEDD4P46934 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.81□□□□□ -1.48
NEDD4P46934 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD4P46934 AL121839.2-201ENST00000565058 6943 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 RNU6-167P-201ENST00000384292 106 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD4P46934 AC104837.2-201ENST00000427236 424 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD4P46934 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD4P46934 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 CYCSP24-201ENST00000445119 316 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 VN1R96P-201ENST00000446052 858 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD4P46934 RPS3AP53-201ENST00000454716 778 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 RN7SL610P-201ENST00000463845 291 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 AC005868.1-201ENST00000536421 331 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms