Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 VDAC2P4-201ENST00000452925 711 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 AC037198.2-201ENST00000478845 733 ntBASIC5.54□□□□□ -1.52
HADHAP40939 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.54□□□□□ -1.52
HADHAP40939 RPL7L1P4-201ENST00000513004 707 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 NOP56P3-201ENST00000549457 385 ntBASIC5.54□□□□□ -1.52
HADHAP40939 NMNAT1P5-201ENST00000559657 841 ntBASIC5.54□□□□□ -1.52
HADHAP40939 SULT1C2P2-201ENST00000562517 294 ntBASIC5.54□□□□□ -1.52
HADHAP40939 MIR4505-201ENST00000582238 73 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.54□□□□□ -1.52
HADHAP40939 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.54□□□□□ -1.52
HADHAP40939 AC021106.3-201ENST00000623925 531 ntBASIC5.54□□□□□ -1.52
HADHAP40939 CU639417.4-201ENST00000623928 207 ntBASIC5.54□□□□□ -1.52
HADHAP40939 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.54□□□□□ -1.52
HADHAP40939 CFTRP2-201ENST00000634304 199 ntBASIC5.54□□□□□ -1.52
HADHAP40939 AL049767.1-202ENST00000637826 242 ntBASIC5.54□□□□□ -1.52
HADHAP40939 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
HADHAP40939 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HADHAP40939 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.53□□□□□ -1.52
HADHAP40939 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HADHAP40939 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
HADHAP40939 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AL596448.1-201ENST00000415024 392 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AL357078.2-201ENST00000416486 427 ntBASIC5.53□□□□□ -1.52
HADHAP40939 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
HADHAP40939 TNPO1P1-201ENST00000423641 1138 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.53□□□□□ -1.52
HADHAP40939 NDUFA5P10-201ENST00000432147 357 ntBASIC5.53□□□□□ -1.52
HADHAP40939 SUMO2P3-201ENST00000438311 288 ntBASIC5.53□□□□□ -1.52
HADHAP40939 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.53□□□□□ -1.52
HADHAP40939 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 RN7SL72P-201ENST00000460697 269 ntBASIC5.53□□□□□ -1.52
HADHAP40939 RN7SL583P-201ENST00000475692 287 ntBASIC5.53□□□□□ -1.52
HADHAP40939 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 AC138832.1-201ENST00000522871 556 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 AC023158.1-201ENST00000561632 1025 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AC007225.2-201ENST00000562529 256 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.53□□□□□ -1.52
HADHAP40939 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.53□□□□□ -1.52
HADHAP40939 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 AC012616.1-201ENST00000600294 197 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AL137072.1-201ENST00000603444 466 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AC135178.6-201ENST00000605314 398 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AC004775.1-201ENST00000607389 753 ntBASIC5.53□□□□□ -1.52
HADHAP40939 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.53□□□□□ -1.52
HADHAP40939 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.53□□□□□ -1.52
HADHAP40939 AL691477.1-201ENST00000624398 162 ntBASIC5.53□□□□□ -1.52
HADHAP40939 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 ZNF733P-202ENST00000444809 1573 ntBASIC5.53□□□□□ -1.52
HADHAP40939 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.53□□□□□ -1.52
HADHAP40939 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HADHAP40939 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.52□□□□□ -1.53
HADHAP40939 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HADHAP40939 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.52□□□□□ -1.53
HADHAP40939 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
HADHAP40939 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HADHAP40939 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 MAPK10-328ENST00000641553 4009 ntBASIC5.52□□□□□ -1.53
HADHAP40939 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HADHAP40939 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.52□□□□□ -1.53
HADHAP40939 Y_RNA.110-201ENST00000363220 99 ntBASIC5.52□□□□□ -1.53
HADHAP40939 U3.7-201ENST00000363668 216 ntBASIC5.52□□□□□ -1.53
HADHAP40939 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HADHAP40939 RNA5SP241-201ENST00000391326 114 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms