Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR550A3-201ENST00000390735 95 ntBASIC4.99□□□□□ -1.61
RORAP35398 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RORAP35398 AC233289.1-201ENST00000403700 508 ntBASIC4.99□□□□□ -1.61
RORAP35398 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RORAP35398 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.99□□□□□ -1.61
RORAP35398 AC017019.1-201ENST00000426129 261 ntBASIC4.99□□□□□ -1.61
RORAP35398 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
RORAP35398 RPL7P61-201ENST00000451721 751 ntBASIC4.99□□□□□ -1.61
RORAP35398 DNAJB5P1-201ENST00000454004 806 ntBASIC4.99□□□□□ -1.61
RORAP35398 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RORAP35398 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.99□□□□□ -1.61
RORAP35398 RPS24P16-201ENST00000497294 392 ntBASIC4.99□□□□□ -1.61
RORAP35398 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.99□□□□□ -1.61
RORAP35398 GTF2F2P1-201ENST00000511083 675 ntBASIC4.99□□□□□ -1.61
RORAP35398 RN7SKP66-201ENST00000516681 231 ntBASIC4.99□□□□□ -1.61
RORAP35398 AP000676.2-201ENST00000529711 301 ntBASIC4.99□□□□□ -1.61
RORAP35398 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.99□□□□□ -1.61
RORAP35398 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.99□□□□□ -1.61
RORAP35398 TMEM30CP-203ENST00000637814 1035 ntBASIC4.99□□□□□ -1.61
RORAP35398 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 TRIM51GP-201ENST00000534741 1350 ntBASIC4.99□□□□□ -1.61
RORAP35398 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RORAP35398 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 AC131971.1-201ENST00000332881 1482 ntBASIC4.99□□□□□ -1.61
RORAP35398 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RORAP35398 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.99□□□□□ -1.61
RORAP35398 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RORAP35398 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RORAP35398 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RORAP35398 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RORAP35398 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 RN7SKP145-201ENST00000363291 303 ntBASIC4.98□□□□□ -1.61
RORAP35398 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.98□□□□□ -1.61
RORAP35398 GPS2P1-201ENST00000411761 986 ntBASIC4.98□□□□□ -1.61
RORAP35398 EI24P4-201ENST00000423683 1078 ntBASIC4.98□□□□□ -1.61
RORAP35398 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 AL590762.4-201ENST00000425885 253 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC009784.1-201ENST00000426484 460 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC244033.1-201ENST00000426826 870 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC124944.2-201ENST00000429866 1242 ntBASIC4.98□□□□□ -1.61
RORAP35398 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.98□□□□□ -1.61
RORAP35398 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC092647.2-201ENST00000452998 253 ntBASIC4.98□□□□□ -1.61
RORAP35398 AL645937.3-201ENST00000453647 936 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC022133.1-201ENST00000490961 571 ntBASIC4.98□□□□□ -1.61
RORAP35398 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 ENPP7P11-201ENST00000505915 627 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 EIF3KP3-201ENST00000514461 639 ntBASIC4.98□□□□□ -1.61
RORAP35398 RFPL4AP5-201ENST00000514977 504 ntBASIC4.98□□□□□ -1.61
RORAP35398 HMGN1P9-201ENST00000515212 298 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
RORAP35398 OR5D15P-201ENST00000531671 942 ntBASIC4.98□□□□□ -1.61
RORAP35398 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.98□□□□□ -1.61
RORAP35398 AP002373.2-201ENST00000541631 1060 ntBASIC4.98□□□□□ -1.61
RORAP35398 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.98□□□□□ -1.61
RORAP35398 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.98□□□□□ -1.61
RORAP35398 AC009597.2-201ENST00000604659 592 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC067838.1-201ENST00000606064 577 ntBASIC4.98□□□□□ -1.61
RORAP35398 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.98□□□□□ -1.61
RORAP35398 AL159169.2-201ENST00000610061 1269 ntBASIC4.98□□□□□ -1.61
RORAP35398 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.98□□□□□ -1.61
RORAP35398 MTCO1P1-201ENST00000624263 1081 ntBASIC4.98□□□□□ -1.61
RORAP35398 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RORAP35398 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.98□□□□□ -1.61
RORAP35398 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RORAP35398 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RORAP35398 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 AC003973.3-201ENST00000624863 2822 ntBASIC4.98□□□□□ -1.61
RORAP35398 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RORAP35398 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 AC023421.1-201ENST00000590535 1785 ntBASIC4.97□□□□□ -1.61
RORAP35398 CASC19-281ENST00000642118 1554 ntBASIC4.97□□□□□ -1.61
RORAP35398 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RORAP35398 SNURFL-201ENST00000309296 343 ntBASIC4.97□□□□□ -1.61
RORAP35398 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 RNU4-4P-201ENST00000364588 130 ntBASIC4.97□□□□□ -1.61
RORAP35398 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms