Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC012497.1-201ENST00000429392 575 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC13P31276 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 SCAND3P1-201ENST00000439854 1060 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC023271.1-201ENST00000445936 1090 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC13P31276 AL672138.1-201ENST00000450604 1015 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 DNAJB5P1-201ENST00000454004 806 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC13P31276 RN7SL197P-201ENST00000466981 299 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC13P31276 RPL5P22-201ENST00000480199 884 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 RN7SL97P-201ENST00000486780 299 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC13P31276 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC13P31276 RN7SKP99-201ENST00000517028 307 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC079064.1-201ENST00000528365 362 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 OR11H3P-201ENST00000554547 982 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC13P31276 AC006116.3-201ENST00000592968 361 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC13P31276 MIR6820-201ENST00000611508 62 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC13P31276 uc_338.18-201ENST00000615451 175 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC135068.5-201ENST00000624197 983 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 AC093535.2-201ENST00000624769 2326 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC13P31276 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC13P31276 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC13P31276 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC13P31276 SNORD56.6-201ENST00000384569 71 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 RNU11-201ENST00000387069 134 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC13P31276 RNA5SP339-201ENST00000390987 122 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 ST13P16-201ENST00000401760 781 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 PPIAP9-201ENST00000403866 498 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AL133388.1-201ENST00000404509 287 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 RPL6P29-201ENST00000414863 865 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AL807761.1-201ENST00000417622 171 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 BTF3P9-201ENST00000418784 283 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC13P31276 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 SRSF1P1-201ENST00000424058 520 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 CACYBPP1-201ENST00000438592 684 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC105399.1-202ENST00000447303 205 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC13P31276 HMGB1P44-201ENST00000508597 572 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 MTND6P2-201ENST00000512226 524 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC13P31276 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC13P31276 AL360012.1-201ENST00000602813 131 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AL049539.1-201ENST00000611964 459 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC016911.1-201ENST00000613297 452 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC091953.3-201ENST00000623220 236 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 AC015908.5-201ENST00000623289 343 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HOXC13P31276 LINC01739-205ENST00000641890 573 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC13P31276 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 AC239868.2-201ENST00000564237 4527 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC13P31276 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC13P31276 AC090017.1-201ENST00000548612 1779 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 AL451142.2-201ENST00000429076 2090 ntBASIC5.62□□□□□ -1.51
HOXC13P31276 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC13P31276 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 AC092681.1-201ENST00000297369 291 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms