Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
ATF4P18848 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATF4P18848 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 MFSD8-239ENST00000641590 2479 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
ATF4P18848 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 RNU1-11P-201ENST00000383975 164 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RNU6-348P-201ENST00000384386 107 ntBASIC6.01□□□□□ -1.45
ATF4P18848 VN2R17P-201ENST00000391712 832 ntBASIC6.01□□□□□ -1.45
ATF4P18848 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 Y_RNA.598-201ENST00000410480 95 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RNA5SP265-201ENST00000411023 111 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC127537.1-201ENST00000418183 748 ntBASIC6.01□□□□□ -1.45
ATF4P18848 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 FNDC3CP-201ENST00000420795 1155 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RPL4P4-201ENST00000422486 1284 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.01□□□□□ -1.45
ATF4P18848 COX6CP15-201ENST00000426313 211 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC104843.2-201ENST00000427666 297 ntBASIC6.01□□□□□ -1.45
ATF4P18848 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 NEFLP1-201ENST00000436364 984 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RPL23AP74-201ENST00000437246 471 ntBASIC6.01□□□□□ -1.45
ATF4P18848 SKP1P1-201ENST00000438081 489 ntBASIC6.01□□□□□ -1.45
ATF4P18848 CXCR2P1-202ENST00000443392 1074 ntBASIC6.01□□□□□ -1.45
ATF4P18848 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.01□□□□□ -1.45
ATF4P18848 AL033528.1-201ENST00000453780 140 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AL139156.3-201ENST00000454802 394 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RNU7-136P-201ENST00000458819 69 ntBASIC6.01□□□□□ -1.45
ATF4P18848 snoU109.1-201ENST00000459339 135 ntBASIC6.01□□□□□ -1.45
ATF4P18848 SNORD42A-201ENST00000459584 64 ntBASIC6.01□□□□□ -1.45
ATF4P18848 OR9M1P-201ENST00000459641 921 ntBASIC6.01□□□□□ -1.45
ATF4P18848 APOOP2-201ENST00000461561 539 ntBASIC6.01□□□□□ -1.45
ATF4P18848 MTND6P6-201ENST00000478031 263 ntBASIC6.01□□□□□ -1.45
ATF4P18848 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 GAPDHP31-201ENST00000509325 1014 ntBASIC6.01□□□□□ -1.45
ATF4P18848 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.01□□□□□ -1.45
ATF4P18848 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.01□□□□□ -1.45
ATF4P18848 AP001000.1-201ENST00000526843 742 ntBASIC6.01□□□□□ -1.45
ATF4P18848 MTND4LP18-201ENST00000526864 291 ntBASIC6.01□□□□□ -1.45
ATF4P18848 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC6.01□□□□□ -1.45
ATF4P18848 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.01□□□□□ -1.45
ATF4P18848 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATF4P18848 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.01□□□□□ -1.45
ATF4P18848 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 AC044860.3-201ENST00000559957 368 ntBASIC6.01□□□□□ -1.45
ATF4P18848 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC6.01□□□□□ -1.45
ATF4P18848 AL133457.1-201ENST00000564251 987 ntBASIC6.01□□□□□ -1.45
ATF4P18848 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 MIR4528-201ENST00000577763 90 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 MIR4801-201ENST00000582704 82 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC087645.1-201ENST00000588528 291 ntBASIC6.01□□□□□ -1.45
ATF4P18848 DYNLL1P1-201ENST00000595442 269 ntBASIC6.01□□□□□ -1.45
ATF4P18848 BNIP3P8-201ENST00000597863 560 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC090186.1-201ENST00000605991 572 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 AC084876.1-201ENST00000612793 641 ntBASIC6.01□□□□□ -1.45
ATF4P18848 AC245033.3-201ENST00000617986 224 ntBASIC6.01□□□□□ -1.45
ATF4P18848 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 AC099654.12-201ENST00000639868 649 ntBASIC6.01□□□□□ -1.45
ATF4P18848 GTF2IP4-201ENST00000453092 2054 ntBASIC6.01□□□□□ -1.45
ATF4P18848 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.01□□□□□ -1.45
ATF4P18848 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.01□□□□□ -1.45
ATF4P18848 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATF4P18848 AC004656.1-201ENST00000568479 4951 ntBASIC6□□□□□ -1.45
ATF4P18848 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATF4P18848 SLC9B1P3-201ENST00000452667 1334 ntBASIC6□□□□□ -1.45
ATF4P18848 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6□□□□□ -1.45
ATF4P18848 AC068769.1-201ENST00000474767 2426 ntBASIC6□□□□□ -1.45
ATF4P18848 AC097504.1-201ENST00000515103 2415 ntBASIC6□□□□□ -1.45
ATF4P18848 DNM1P47-203ENST00000571780 12667 ntBASIC6□□□□□ -1.45
ATF4P18848 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6□□□□□ -1.45
ATF4P18848 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
ATF4P18848 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATF4P18848 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATF4P18848 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATF4P18848 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms