Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT3P12035 SAMMSON-213ENST00000641336 1521 ntBASIC5.4□□□□□ -1.54
KRT3P12035 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRT3P12035 SNORA17.1-201ENST00000362945 126 ntBASIC5.4□□□□□ -1.54
KRT3P12035 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT3P12035 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT3P12035 DUTP5-201ENST00000406790 469 ntBASIC5.4□□□□□ -1.54
KRT3P12035 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT3P12035 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT3P12035 RSL24D1P2-201ENST00000445584 366 ntBASIC5.4□□□□□ -1.54
KRT3P12035 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT3P12035 PPIAP20-201ENST00000449839 135 ntBASIC5.4□□□□□ -1.54
KRT3P12035 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT3P12035 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.4□□□□□ -1.54
KRT3P12035 AC007225.2-201ENST00000562529 256 ntBASIC5.4□□□□□ -1.54
KRT3P12035 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRT3P12035 MIR3176-201ENST00000582210 90 ntBASIC5.4□□□□□ -1.54
KRT3P12035 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT3P12035 OR7M1P-201ENST00000608946 533 ntBASIC5.4□□□□□ -1.54
KRT3P12035 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.4□□□□□ -1.54
KRT3P12035 AP002505.2-201ENST00000623585 696 ntBASIC5.4□□□□□ -1.54
KRT3P12035 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT3P12035 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.4□□□□□ -1.54
KRT3P12035 AC063976.2-201ENST00000425667 3556 ntBASIC5.4□□□□□ -1.55
KRT3P12035 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
KRT3P12035 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT3P12035 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KRT3P12035 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT3P12035 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
KRT3P12035 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT3P12035 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
KRT3P12035 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT3P12035 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT3P12035 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.4□□□□□ -1.55
KRT3P12035 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 TCP1P3-201ENST00000414406 1498 ntBASIC5.39□□□□□ -1.55
KRT3P12035 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 PANDAR-201ENST00000629595 1506 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC004817.4-201ENST00000602396 3625 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KRT3P12035 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
KRT3P12035 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KRT3P12035 MARK2P12-201ENST00000420129 585 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.39□□□□□ -1.55
KRT3P12035 COX6CP13-201ENST00000428703 226 ntBASIC5.39□□□□□ -1.55
KRT3P12035 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 MAPRE1P3-201ENST00000435438 796 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC245047.2-201ENST00000441060 530 ntBASIC5.39□□□□□ -1.55
KRT3P12035 CYCSP24-201ENST00000445119 316 ntBASIC5.39□□□□□ -1.55
KRT3P12035 RAD1P2-201ENST00000446414 663 ntBASIC5.39□□□□□ -1.55
KRT3P12035 RBMY2TP-201ENST00000451162 947 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC069304.1-201ENST00000491593 704 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
KRT3P12035 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.39□□□□□ -1.55
KRT3P12035 OR4A46P-201ENST00000527255 933 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 AC018695.5-201ENST00000605872 315 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AL159169.2-201ENST00000610061 1269 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC126915.2-201ENST00000610957 190 ntBASIC5.39□□□□□ -1.55
KRT3P12035 AC022467.1-201ENST00000614738 749 ntBASIC5.39□□□□□ -1.55
KRT3P12035 RPSAP73-201ENST00000614820 330 ntBASIC5.39□□□□□ -1.55
KRT3P12035 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 AC011755.1-201ENST00000623763 2049 ntBASIC5.39□□□□□ -1.55
KRT3P12035 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT3P12035 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRT3P12035 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRT3P12035 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT3P12035 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRT3P12035 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT3P12035 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
KRT3P12035 RN7SKP113-201ENST00000363891 295 ntBASIC5.38□□□□□ -1.55
KRT3P12035 RN7SKP126-201ENST00000411143 300 ntBASIC5.38□□□□□ -1.55
KRT3P12035 VN1R31P-201ENST00000417498 730 ntBASIC5.38□□□□□ -1.55
KRT3P12035 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
KRT3P12035 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT3P12035 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT3P12035 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT3P12035 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT3P12035 XKRYP6-201ENST00000440468 1116 ntBASIC5.38□□□□□ -1.55
KRT3P12035 XKRYP3-201ENST00000442113 1116 ntBASIC5.38□□□□□ -1.55
KRT3P12035 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT3P12035 AC091180.1-201ENST00000462104 372 ntBASIC5.38□□□□□ -1.55
KRT3P12035 RN7SL443P-201ENST00000464331 290 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms