Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC245096.1-201ENST00000413104 546 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 NDUFS5P5-201ENST00000437256 321 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 VN1R34P-201ENST00000447387 883 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 EPS15P1-201ENST00000448836 336 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC005077.1-201ENST00000449226 375 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AP006222.1-205ENST00000450734 457 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 RN7SL193P-201ENST00000491708 276 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 Y_RNA.695-201ENST00000516715 107 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 IGKV1D-22-201ENST00000518953 324 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC079600.1-201ENST00000550326 297 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 ATP5F1P7-201ENST00000567330 760 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AP005119.1-201ENST00000580956 292 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC079089.3-201ENST00000603094 673 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 RN7SL787P-201ENST00000613000 284 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC016769.4-201ENST00000616893 535 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC009878.1-201ENST00000621819 340 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AL596244.1-201ENST00000567068 3779 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AC027279.4-201ENST00000624371 2072 ntBASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CSB-PGBD3P0DP91 AL359195.2-201ENST00000623657 4412 ntBASIC8.34□□□□□ -1.08
CSB-PGBD3P0DP91 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
CSB-PGBD3P0DP91 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
CSB-PGBD3P0DP91 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 RNU1-49P-201ENST00000363468 159 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 Y_RNA.813-201ENST00000364639 102 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 U3.25-201ENST00000391209 220 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 RN7SKP286-201ENST00000410894 299 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 MTCO2P34-201ENST00000421994 607 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 TNPO1P1-201ENST00000423641 1138 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 TUBB4BP6-201ENST00000437576 479 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC007327.1-201ENST00000447461 264 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 MTND2P24-201ENST00000453434 806 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 RN7SL834P-201ENST00000461450 286 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL603882.1-201ENST00000463059 681 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 RN7SL629P-201ENST00000489622 285 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC010343.2-201ENST00000510162 224 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 IGLV3-6-201ENST00000523937 250 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC016957.1-201ENST00000534895 309 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL121766.1-201ENST00000547436 487 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 ELOCP32-201ENST00000548625 324 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC112230.1-201ENST00000604342 547 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AL392112.1-201ENST00000605115 829 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AF287957.1-201ENST00000607368 1595 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms