Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 IGLV3-26-201ENST00000520756 302 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.83□□□□□ -1.8
CXCL1P09341 AC027369.2-201ENST00000528030 440 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 CYCSP28-201ENST00000534284 321 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.83□□□□□ -1.8
CXCL1P09341 AL512310.9-201ENST00000553311 948 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AC087477.6-201ENST00000559595 843 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.83□□□□□ -1.8
CXCL1P09341 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.83□□□□□ -1.8
CXCL1P09341 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CXCL1P09341 AL356752.1-201ENST00000615844 593 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AC015804.1-201ENST00000622935 435 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.83□□□□□ -1.8
CXCL1P09341 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC3.83□□□□□ -1.8
CXCL1P09341 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.83□□□□□ -1.8
CXCL1P09341 CR383656.5-201ENST00000547616 1340 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 AC245100.2-201ENST00000454544 1679 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CXCL1P09341 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 OR13C1P-202ENST00000641378 2919 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.82□□□□□ -1.8
CXCL1P09341 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 AP001002.1-201ENST00000625148 1513 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 AC106872.5-201ENST00000508856 1416 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CXCL1P09341 RNA5SP232-201ENST00000364144 119 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 AC007068.1-201ENST00000396690 844 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.82□□□□□ -1.8
CXCL1P09341 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 BMS1P17-202ENST00000416720 316 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 RPL34P3-201ENST00000421454 338 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.82□□□□□ -1.8
CXCL1P09341 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 Z84478.1-201ENST00000438230 1219 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 RPL7P33-201ENST00000444159 742 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 AL445665.1-202ENST00000452436 324 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 AC011476.1-201ENST00000466725 307 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 RPS26P28-201ENST00000470806 348 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.82□□□□□ -1.8
CXCL1P09341 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 LDHBP3-201ENST00000514909 822 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 BTG1P1-201ENST00000540396 508 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC006512.2-201ENST00000543250 486 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.82□□□□□ -1.8
CXCL1P09341 AC069240.1-201ENST00000548774 375 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.82□□□□□ -1.8
CXCL1P09341 AL121834.1-201ENST00000572284 509 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.82□□□□□ -1.8
CXCL1P09341 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.82□□□□□ -1.8
CXCL1P09341 COX6CP4-201ENST00000605798 228 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 AP005131.7-201ENST00000610087 611 ntBASIC3.82□□□□□ -1.8
CXCL1P09341 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CXCL1P09341 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.82□□□□□ -1.8
CXCL1P09341 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CXCL1P09341 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXCL1P09341 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms