Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC099654.2-201ENST00000433031 1980 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AL645927.1-201ENST00000396783 406 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 RNA5SP345-201ENST00000410646 108 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC092162.1-201ENST00000432828 434 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 RPL23AP56-201ENST00000460778 453 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC090142.2-201ENST00000483263 416 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 RN7SL214P-201ENST00000487317 265 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC004453.1-201ENST00000487895 408 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 BTF3P13-201ENST00000513224 490 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC027308.1-201ENST00000517993 110 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 OR5AZ1P-201ENST00000527448 943 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AL049839.1-201ENST00000556151 657 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 MIR4433B-201ENST00000581329 102 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC011453.2-201ENST00000603737 729 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC013244.1-201ENST00000604279 193 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 MIR7155-201ENST00000615925 56 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC068870.2-201ENST00000620635 389 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 INTS6P1-201ENST00000504674 2530 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AL031595.2-201ENST00000624215 19071 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 MIPEPP2-201ENST00000422560 1819 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC005261.2-201ENST00000593427 4258 ntBASIC4.97□□□□□ -1.61
HLA-DQB2P05538 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DQB2P05538 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
HLA-DQB2P05538 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 MIR105-2-201ENST00000385083 81 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC005522.1-201ENST00000395416 346 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 OR2AM1P-201ENST00000422137 422 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC112498.1-201ENST00000444401 332 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 GYG1P1-201ENST00000460864 698 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC012123.2-201ENST00000485809 248 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 MORF4L1P3-201ENST00000525966 950 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 EIF4A2P5-201ENST00000529914 499 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC009852.2-201ENST00000567898 485 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 CYCSP40-201ENST00000575927 294 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 OOSP1P2-201ENST00000579644 351 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC020910.3-201ENST00000603701 874 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC073575.2-201ENST00000614212 627 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC243960.7-201ENST00000623532 707 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC138965.3-201ENST00000623875 498 ntBASIC4.96□□□□□ -1.62
HLA-DQB2P05538 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQB2P05538 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 IRF5P1-201ENST00000504852 2164 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 HMGB3P7-201ENST00000400214 611 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AL589647.1-201ENST00000402485 466 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 RPL10P10-201ENST00000403509 664 ntBASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQB2P05538 GTF3AP5-201ENST00000442645 697 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms