Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.82□□□□□ -1.48
COL2A1P02458 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
COL2A1P02458 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 PRPF19P1-201ENST00000584766 898 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.81□□□□□ -1.48
COL2A1P02458 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL2A1P02458 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL2A1P02458 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL2A1P02458 NCLP2-201ENST00000416078 1462 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL2A1P02458 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.81□□□□□ -1.48
COL2A1P02458 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL2A1P02458 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.81□□□□□ -1.48
COL2A1P02458 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 ARL4AP4-201ENST00000434170 518 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 KCTD10P1-201ENST00000434203 625 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.81□□□□□ -1.48
COL2A1P02458 AC010733.1-201ENST00000451515 401 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.81□□□□□ -1.48
COL2A1P02458 RPS5P7-201ENST00000456664 608 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 RN7SKP276-201ENST00000516242 268 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 BUD31P1-201ENST00000521828 359 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 RN7SL802P-201ENST00000577858 299 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 AP001542.1-201ENST00000591314 200 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 AL590392.1-201ENST00000604960 446 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 AC010857.1-201ENST00000606398 594 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 AC010424.2-201ENST00000607594 443 ntBASIC5.81□□□□□ -1.48
COL2A1P02458 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL2A1P02458 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.81□□□□□ -1.48
COL2A1P02458 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.81□□□□□ -1.48
COL2A1P02458 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.8□□□□□ -1.48
COL2A1P02458 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 AL132640.2-201ENST00000559968 1698 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 DHX40P1-201ENST00000588725 1412 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 MIR1193-201ENST00000408109 78 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 RN7SKP16-201ENST00000410180 299 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.8□□□□□ -1.48
COL2A1P02458 TBCAP2-201ENST00000416175 326 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 RPS27AP7-201ENST00000422792 455 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AC012497.1-201ENST00000429392 575 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.8□□□□□ -1.48
COL2A1P02458 SCAND3P1-201ENST00000439854 1060 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.8□□□□□ -1.48
COL2A1P02458 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.8□□□□□ -1.48
COL2A1P02458 AP003080.1-202ENST00000526526 915 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AC107308.1-201ENST00000615897 301 ntBASIC5.8□□□□□ -1.48
COL2A1P02458 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.8□□□□□ -1.48
COL2A1P02458 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.8□□□□□ -1.48
COL2A1P02458 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL2A1P02458 ZFRP1-201ENST00000457579 2970 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 AC010928.1-201ENST00000592477 1447 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL2A1P02458 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.79□□□□□ -1.48
COL2A1P02458 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.79□□□□□ -1.48
COL2A1P02458 CHIAP3-201ENST00000423668 1133 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.79□□□□□ -1.48
COL2A1P02458 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.79□□□□□ -1.48
COL2A1P02458 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.79□□□□□ -1.48
COL2A1P02458 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.79□□□□□ -1.48
COL2A1P02458 RPL26P30-202ENST00000602923 645 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 AL049794.2-201ENST00000616301 365 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
COL2A1P02458 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 AC007382.1-201ENST00000624376 2618 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms