Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
COL1A1P02452 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 RPL32P3-201ENST00000359025 275 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL1A1P02452 AL049693.1-201ENST00000402760 611 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 FABP7P1-201ENST00000424004 391 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 COX6CP13-201ENST00000428703 226 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.95□□□□□ -1.46
COL1A1P02452 NIFKP7-201ENST00000503365 834 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.95□□□□□ -1.46
COL1A1P02452 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 AC026688.1-201ENST00000520639 1168 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 SOX5P1-201ENST00000524155 1127 ntBASIC5.95□□□□□ -1.46
COL1A1P02452 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL1A1P02452 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.94□□□□□ -1.46
COL1A1P02452 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.94□□□□□ -1.46
COL1A1P02452 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 AL590240.1-201ENST00000334118 313 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 SNORA73.1-201ENST00000363107 205 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AC007618.1-201ENST00000366455 732 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.94□□□□□ -1.46
COL1A1P02452 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 OR51B3P-201ENST00000412287 913 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.94□□□□□ -1.46
COL1A1P02452 NRBF2P3-201ENST00000432731 865 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AC073052.1-201ENST00000440417 714 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 OR52E3P-201ENST00000452083 936 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.94□□□□□ -1.46
COL1A1P02452 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.94□□□□□ -1.46
COL1A1P02452 AC009643.1-201ENST00000532030 391 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AL049839.1-201ENST00000556151 657 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 AC009704.2-201ENST00000618739 483 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 AC019206.1-201ENST00000621938 425 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.94□□□□□ -1.46
COL1A1P02452 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL1A1P02452 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL1A1P02452 AP001029.2-203ENST00000589795 4910 ntBASIC5.94□□□□□ -1.46
COL1A1P02452 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL1A1P02452 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.93□□□□□ -1.46
COL1A1P02452 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.93□□□□□ -1.46
COL1A1P02452 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.93□□□□□ -1.46
COL1A1P02452 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.93□□□□□ -1.46
COL1A1P02452 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.93□□□□□ -1.46
COL1A1P02452 AC093720.1-201ENST00000505681 714 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 NDUFB4P11-201ENST00000560510 395 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 TVP23CP2-201ENST00000571473 623 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 AP000919.1-201ENST00000582850 985 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 RPL26P30-202ENST00000602923 645 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 AC018695.5-201ENST00000605872 315 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 AC006338.2-201ENST00000616864 791 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL1A1P02452 AC068446.1-201ENST00000556425 1549 ntBASIC5.93□□□□□ -1.46
COL1A1P02452 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.93□□□□□ -1.46
COL1A1P02452 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 AP005432.1-201ENST00000580891 3485 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms