Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXA3O43365 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 Z97989.1-201ENST00000531702 2421 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXA3O43365 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXA3O43365 Y_RNA.18-201ENST00000362461 102 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 SNORA4.1-201ENST00000364263 144 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXA3O43365 MIR1204-201ENST00000408388 67 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 MIR1282-201ENST00000408865 101 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 AC114814.2-201ENST00000419195 485 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AK4P4-201ENST00000419465 646 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 CYCSP46-201ENST00000423569 204 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 USP9YP35-201ENST00000435696 412 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 RPL12P11-201ENST00000439970 501 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 MTATP6P23-201ENST00000440153 476 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL353572.1-201ENST00000442490 417 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 ST13P20-201ENST00000447996 1065 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 MTCO3P11-201ENST00000455103 774 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 BX248409.1-201ENST00000455497 255 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 SNRPGP9-201ENST00000456025 225 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 RN7SL552P-201ENST00000462094 276 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 RPS7P6-201ENST00000485777 579 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 RN7SL362P-201ENST00000494228 267 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 AC090071.1-201ENST00000507713 644 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 ATP1B1P1-201ENST00000509767 915 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC018797.1-201ENST00000510791 255 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 SNORA74.1-201ENST00000516320 180 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 DUXAP2-201ENST00000519198 589 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC005363.1-201ENST00000530779 351 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC084121.1-201ENST00000533882 835 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC026826.3-201ENST00000561747 158 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AGGF1P8-201ENST00000562979 1000 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 OR1E3-201ENST00000575608 948 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 MIR4310-201ENST00000582950 57 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AL390838.2-201ENST00000602394 274 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC083899.3-201ENST00000603413 594 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AP003973.1-201ENST00000604639 691 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AC112220.3-201ENST00000605502 502 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC025594.3-201ENST00000613068 790 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 AL445670.1-201ENST00000618889 801 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXA3O43365 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXA3O43365 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXA3O43365 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 CASC19-260ENST00000641828 2001 ntBASIC5.31□□□□□ -1.56
HOXA3O43365 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA3O43365 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXA3O43365 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms