Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1AO00322 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1AO00322 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.66
UPK1AO00322 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1AO00322 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1AO00322 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UPK1AO00322 MAPK10-349ENST00000641767 3661 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC008549.2-201ENST00000333482 706 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC092642.1-201ENST00000392417 425 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 ATP5HP3-201ENST00000396994 486 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 LRRC37BP1-201ENST00000398851 714 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AP000580.1-201ENST00000404439 358 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 RN7SKP125-201ENST00000410481 302 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AL355433.1-201ENST00000422804 300 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC013410.1-201ENST00000436223 1232 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.7□□□□□ -1.66
UPK1AO00322 AL354714.3-201ENST00000447284 493 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 HMGB1P4-201ENST00000455362 567 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC093166.2-201ENST00000455969 1017 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC090589.1-201ENST00000473109 362 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1AO00322 RPS18P6-201ENST00000476880 458 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 NPM1P29-201ENST00000483112 803 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.7□□□□□ -1.66
UPK1AO00322 RN7SKP260-201ENST00000516907 149 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 AC012339.2-201ENST00000523996 453 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1AO00322 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC105254.2-201ENST00000603636 436 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 MIR6826-201ENST00000617808 98 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 AC132825.8-201ENST00000640783 297 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UPK1AO00322 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1AO00322 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UPK1AO00322 AL590763.1-201ENST00000398297 1545 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1AO00322 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UPK1AO00322 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
UPK1AO00322 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1AO00322 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 AC005005.4-201ENST00000623789 16698 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 NXF4-202ENST00000416098 1465 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 SNURFL-201ENST00000309296 343 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 RPL23P2-201ENST00000320371 421 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 SNORA66-201ENST00000384792 133 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 RN7SKP229-201ENST00000410465 302 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 RN7SKP273-201ENST00000411392 314 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AL445213.1-201ENST00000412589 747 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 QRSL1P2-201ENST00000418582 964 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 EIF4HP2-201ENST00000424380 563 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 RPL34P20-201ENST00000442771 351 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 TCEA1P1-201ENST00000449716 880 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 IGHV5-78-201ENST00000450948 295 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AL691482.1-201ENST00000453255 87 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms