Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC108022.1-201ENST00000493466 478 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL15P21-201ENST00000495592 567 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ENPP7P9-201ENST00000514456 627 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 CR383658.1-201ENST00000514609 734 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 TRIM77BP-201ENST00000524985 1119 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 STARD6-202ENST00000577499 696 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 FAM27E4-201ENST00000605259 342 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008592.5-201ENST00000607856 547 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 FAM27E2-201ENST00000619668 403 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC129915.3-201ENST00000634128 948 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 OR52B5P-202ENST00000641118 1110 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL929601.4-201ENST00000613011 1341 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC007342.7-201ENST00000624610 2337 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL11P4-201ENST00000332269 436 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 RNU1-83P-201ENST00000363426 164 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 HIST1H3PS1-201ENST00000404612 417 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 RNA5SP155-201ENST00000411154 129 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 JKAMPP1-201ENST00000413804 919 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 GAS5-202ENST00000414075 413 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 TRIM60P17-201ENST00000415181 719 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 SLC35E1P1-201ENST00000419313 864 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 COX6CP13-201ENST00000428703 226 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 HMGB3P5-201ENST00000428894 612 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 BSNDP4-201ENST00000436076 388 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 PSMC1P13-201ENST00000458195 985 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL32P33-201ENST00000487023 394 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 MTND6P2-201ENST00000512226 524 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 IGHV3-63-201ENST00000518422 341 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC135983.3-201ENST00000528049 1226 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC100770.1-201ENST00000532310 322 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 DCN-210ENST00000547568 823 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 AC084757.1-201ENST00000559987 490 ntBASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.68□□□□□ -1.98
CHKB-CPT1BH3BT56 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms