Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC126177.5-201ENST00000549599 178 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC040958.1-201ENST00000561102 201 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC023825.1-201ENST00000566704 1030 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC005341.1-201ENST00000571086 708 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC124283.4-201ENST00000581815 456 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 MTCO3P22-201ENST00000603219 784 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 SUGT1P3-202ENST00000604259 383 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL162431.4-201ENST00000604674 411 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC007204.2-201ENST00000615022 616 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 MIR8080-201ENST00000622224 89 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AP001962.1-201ENST00000624114 559 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL691477.1-201ENST00000624398 162 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORA17.5-201ENST00000630429 132 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC092376.2-201ENST00000622621 4116 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 RNA5SP319-201ENST00000362768 119 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 OR1L6-202ENST00000373684 1044 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 RNA5SP339-201ENST00000390987 122 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL592310.1-201ENST00000414330 671 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 NAP1L4P2-201ENST00000425958 899 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 PCNPP2-201ENST00000441651 455 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL591719.1-201ENST00000444669 744 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL031313.1-201ENST00000448435 256 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL451063.1-201ENST00000450164 1133 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 GAPDHP14-201ENST00000450472 937 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC104634.1-201ENST00000452720 462 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 CBX1P2-201ENST00000453841 458 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC105918.1-201ENST00000474399 838 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 OR5H3P-201ENST00000502817 919 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORD95-201ENST00000579879 68 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AP000919.1-202ENST00000581139 1264 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC079880.2-201ENST00000603790 1213 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC009027.1-201ENST00000604510 479 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AL450336.1-201ENST00000605180 586 ntBASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV5S1A1TA0A578 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms