Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 EGLN1P1-201ENST00000531623 762 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 DGCR10-201ENST00000609839 495 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 AP005212.1-201ENST00000581547 1997 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 TSPY14P-201ENST00000303979 915 ntBASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 WWOX-216ENST00000569818 525 ntBASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 AC087388.1-201ENST00000571370 1112 ntBASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 AC006011.2-201ENST00000621313 1158 ntBASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 AC131212.4-201ENST00000623606 975 ntBASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX11Q9Y5W9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX11Q9Y5W9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX11Q9Y5W9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX11Q9Y5W9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 INGX-201ENST00000359239 846 ntBASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX11Q9Y5W9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms