Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 AC128676.1-201ENST00000454392 318 ntBASIC19.62■□□□□ 0.73
PKP3Q9Y446 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.62■□□□□ 0.73
PKP3Q9Y446 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKP3Q9Y446 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
PKP3Q9Y446 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 AC138932.1-201ENST00000534164 6830 ntBASIC19.6■□□□□ 0.73
PKP3Q9Y446 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 KRT18P29-201ENST00000397031 1267 ntBASIC19.6■□□□□ 0.73
PKP3Q9Y446 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 AC239809.2-201ENST00000415381 517 ntBASIC19.6■□□□□ 0.73
PKP3Q9Y446 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 ITM2C-210ENST00000620962 501 ntBASIC19.6■□□□□ 0.73
PKP3Q9Y446 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
PKP3Q9Y446 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP3Q9Y446 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 RN7SL471P-201ENST00000580476 299 ntBASIC19.59■□□□□ 0.73
PKP3Q9Y446 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.59■□□□□ 0.73
PKP3Q9Y446 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 AL023875.1-201ENST00000640777 796 ntBASIC19.59■□□□□ 0.73
PKP3Q9Y446 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 NBPF21P-201ENST00000425093 1451 ntBASIC19.59■□□□□ 0.73
PKP3Q9Y446 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP3Q9Y446 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP3Q9Y446 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms