Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 AP000997.3-201ENST00000623333 2250 ntBASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 WIZP1-201ENST00000531444 2299 ntBASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COMMD3Q9UBI1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TSPY26P-201ENST00000476365 1326 ntBASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COMMD3Q9UBI1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COMMD3Q9UBI1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms