Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 RNA5SP413-201ENST00000516373 109 ntBASIC16.17■□□□□ 0.18
CALYQ9NYX4 UNC93B5-201ENST00000530315 699 ntBASIC16.17■□□□□ 0.18
CALYQ9NYX4 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 AL121829.2-201ENST00000620908 328 ntBASIC16.17■□□□□ 0.18
CALYQ9NYX4 AP006587.1-201ENST00000534129 1502 ntBASIC16.17■□□□□ 0.18
CALYQ9NYX4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 AC093484.2-201ENST00000580996 2166 ntBASIC16.17■□□□□ 0.18
CALYQ9NYX4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.17■□□□□ 0.18
CALYQ9NYX4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CALYQ9NYX4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 AC007952.6-201ENST00000573168 2673 ntBASIC16.16■□□□□ 0.18
CALYQ9NYX4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 AC003957.1-201ENST00000625108 2673 ntBASIC16.16■□□□□ 0.18
CALYQ9NYX4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.16■□□□□ 0.18
CALYQ9NYX4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CALYQ9NYX4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 YBX1P10-201ENST00000444752 975 ntBASIC16.15■□□□□ 0.18
CALYQ9NYX4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALYQ9NYX4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.14■□□□□ 0.18
CALYQ9NYX4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CALYQ9NYX4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
CALYQ9NYX4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 POM121L13P-201ENST00000422362 380 ntBASIC16.14■□□□□ 0.17
CALYQ9NYX4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CALYQ9NYX4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALYQ9NYX4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms