Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXC2Q99958 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
FOXC2Q99958 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXC2Q99958 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXC2Q99958 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
FOXC2Q99958 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 GPALPP1-207ENST00000611650 899 ntBASIC16.48■□□□□ 0.23
FOXC2Q99958 AC012313.10-201ENST00000623509 926 ntBASIC16.48■□□□□ 0.23
FOXC2Q99958 AL023973.1-201ENST00000624619 620 ntBASIC16.48■□□□□ 0.23
FOXC2Q99958 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FOXC2Q99958 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXC2Q99958 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXC2Q99958 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXC2Q99958 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
FOXC2Q99958 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXC2Q99958 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 AC246785.2-201ENST00000432512 513 ntBASIC16.47■□□□□ 0.23
FOXC2Q99958 FDX1P1-201ENST00000449115 551 ntBASIC16.47■□□□□ 0.23
FOXC2Q99958 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.47■□□□□ 0.23
FOXC2Q99958 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXC2Q99958 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXC2Q99958 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FOXC2Q99958 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 AC116351.2-201ENST00000606540 1585 ntBASIC16.47■□□□□ 0.23
FOXC2Q99958 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXC2Q99958 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
FOXC2Q99958 AP000523.1-201ENST00000398242 1049 ntBASIC16.46■□□□□ 0.23
FOXC2Q99958 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FOXC2Q99958 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXC2Q99958 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXC2Q99958 ZNF444P1-201ENST00000559497 298 ntBASIC16.46■□□□□ 0.23
FOXC2Q99958 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXC2Q99958 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXC2Q99958 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXC2Q99958 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXC2Q99958 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
FOXC2Q99958 C1orf229-201ENST00000623686 2258 ntBASIC16.45■□□□□ 0.22
FOXC2Q99958 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 CA15P1-201ENST00000481698 905 ntBASIC16.45■□□□□ 0.22
FOXC2Q99958 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXC2Q99958 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXC2Q99958 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXC2Q99958 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXC2Q99958 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXC2Q99958 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXC2Q99958 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 TFP1-202ENST00000475455 1573 ntBASIC16.45■□□□□ 0.22
FOXC2Q99958 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXC2Q99958 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXC2Q99958 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms