Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
SCAF11Q99590 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF11Q99590 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF11Q99590 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF11Q99590 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF11Q99590 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF11Q99590 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF11Q99590 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF11Q99590 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC28.17■■■□□ 2.1
SCAF11Q99590 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC28.17■■■□□ 2.1
SCAF11Q99590 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC28.17■■■□□ 2.1
SCAF11Q99590 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC28.17■■■□□ 2.1
SCAF11Q99590 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
SCAF11Q99590 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF11Q99590 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC28.16■■■□□ 2.1
SCAF11Q99590 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC28.16■■■□□ 2.1
SCAF11Q99590 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 GOLGA6L3-201ENST00000507199 1679 ntBASIC28.16■■■□□ 2.1
SCAF11Q99590 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC28.16■■■□□ 2.1
SCAF11Q99590 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC28.16■■■□□ 2.1
SCAF11Q99590 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF11Q99590 AC092720.2-201ENST00000602388 1665 ntBASIC28.16■■■□□ 2.1
SCAF11Q99590 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC28.15■■■□□ 2.1
SCAF11Q99590 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
SCAF11Q99590 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC28.15■■■□□ 2.1
SCAF11Q99590 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC28.15■■■□□ 2.1
SCAF11Q99590 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF11Q99590 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SCAF11Q99590 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC28.15■■■□□ 2.1
SCAF11Q99590 TSPY17P-201ENST00000450329 467 ntBASIC28.15■■■□□ 2.1
SCAF11Q99590 Z85996.1-201ENST00000494644 937 ntBASIC28.15■■■□□ 2.1
SCAF11Q99590 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.15■■■□□ 2.1
SCAF11Q99590 AL031432.5-201ENST00000641059 760 ntBASIC28.15■■■□□ 2.1
SCAF11Q99590 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC28.14■■■□□ 2.1
SCAF11Q99590 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC28.14■■■□□ 2.1
SCAF11Q99590 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SCAF11Q99590 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SCAF11Q99590 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
SCAF11Q99590 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SCAF11Q99590 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
SCAF11Q99590 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
SCAF11Q99590 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SCAF11Q99590 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SCAF11Q99590 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
SCAF11Q99590 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC28.13■■■□□ 2.09
SCAF11Q99590 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC28.13■■■□□ 2.09
SCAF11Q99590 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC28.13■■■□□ 2.09
SCAF11Q99590 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
SCAF11Q99590 VENTXP5-201ENST00000523979 775 ntBASIC28.13■■■□□ 2.09
SCAF11Q99590 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
SCAF11Q99590 AL512604.3-201ENST00000569583 964 ntBASIC28.13■■■□□ 2.09
SCAF11Q99590 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SCAF11Q99590 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC28.12■■■□□ 2.09
SCAF11Q99590 AC018553.1-201ENST00000616682 1458 ntBASIC28.12■■■□□ 2.09
SCAF11Q99590 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC28.12■■■□□ 2.09
SCAF11Q99590 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC28.12■■■□□ 2.09
SCAF11Q99590 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC28.12■■■□□ 2.09
SCAF11Q99590 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SCAF11Q99590 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SCAF11Q99590 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SCAF11Q99590 AC246785.2-201ENST00000432512 513 ntBASIC28.11■■■□□ 2.09
SCAF11Q99590 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SCAF11Q99590 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SCAF11Q99590 ETFA-216ENST00000560726 942 ntTSL 3 BASIC28.11■■■□□ 2.09
SCAF11Q99590 AL136038.3-201ENST00000561909 1096 ntBASIC28.11■■■□□ 2.09
SCAF11Q99590 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
SCAF11Q99590 PALM-208ENST00000592155 2272 ntTSL 4 BASIC28.11■■■□□ 2.09
SCAF11Q99590 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
SCAF11Q99590 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms