Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
EYA3Q99504 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EYA3Q99504 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.79■■□□□ 1.4
EYA3Q99504 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.79■■□□□ 1.4
EYA3Q99504 AL353719.1-201ENST00000566847 864 ntBASIC23.79■■□□□ 1.4
EYA3Q99504 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
EYA3Q99504 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
EYA3Q99504 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
EYA3Q99504 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.78■■□□□ 1.4
EYA3Q99504 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
EYA3Q99504 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EYA3Q99504 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.78■■□□□ 1.4
EYA3Q99504 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.77■■□□□ 1.4
EYA3Q99504 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.77■■□□□ 1.4
EYA3Q99504 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
EYA3Q99504 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.77■■□□□ 1.4
EYA3Q99504 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.77■■□□□ 1.4
EYA3Q99504 AL031432.5-201ENST00000641059 760 ntBASIC23.77■■□□□ 1.4
EYA3Q99504 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 BX119927.1-201ENST00000636596 1552 ntBASIC23.77■■□□□ 1.4
EYA3Q99504 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EYA3Q99504 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.77■■□□□ 1.4
EYA3Q99504 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
EYA3Q99504 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.76■■□□□ 1.39
EYA3Q99504 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.76■■□□□ 1.39
EYA3Q99504 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.76■■□□□ 1.39
EYA3Q99504 CA15P1-201ENST00000481698 905 ntBASIC23.76■■□□□ 1.39
EYA3Q99504 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.76■■□□□ 1.39
EYA3Q99504 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
EYA3Q99504 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.76■■□□□ 1.39
EYA3Q99504 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.76■■□□□ 1.39
EYA3Q99504 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
EYA3Q99504 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.75■■□□□ 1.39
EYA3Q99504 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.75■■□□□ 1.39
EYA3Q99504 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 AP001271.2-201ENST00000624018 1556 ntBASIC23.75■■□□□ 1.39
EYA3Q99504 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.75■■□□□ 1.39
EYA3Q99504 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.75■■□□□ 1.39
EYA3Q99504 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.75■■□□□ 1.39
EYA3Q99504 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.75■■□□□ 1.39
EYA3Q99504 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.75■■□□□ 1.39
EYA3Q99504 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.75■■□□□ 1.39
EYA3Q99504 AC011558.1-201ENST00000623459 338 ntBASIC23.75■■□□□ 1.39
EYA3Q99504 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.75■■□□□ 1.39
EYA3Q99504 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.75■■□□□ 1.39
EYA3Q99504 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.75■■□□□ 1.39
EYA3Q99504 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EYA3Q99504 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms