Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 RCC2P6-201ENST00000526625 1557 ntBASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD1Q96PZ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 RNA5SP419-201ENST00000515908 135 ntBASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 AC092667.1-201ENST00000434301 2586 ntBASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.68■□□□□ 0.26
CSMD1Q96PZ7 PMS2P1-201ENST00000431037 1228 ntBASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CSMD1Q96PZ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 AL355385.1-201ENST00000606123 409 ntBASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 AP000692.2-201ENST00000608391 879 ntBASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 AL512604.3-201ENST00000569583 964 ntBASIC16.66■□□□□ 0.26
CSMD1Q96PZ7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AC117500.6-201ENST00000624871 588 ntBASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD1Q96PZ7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.64■□□□□ 0.26
CSMD1Q96PZ7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.64■□□□□ 0.26
CSMD1Q96PZ7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CSMD1Q96PZ7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.26
CSMD1Q96PZ7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms