Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.42■□□□□ 0.22
TIMD4Q96H15 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 AL031985.4-201ENST00000642138 673 ntBASIC16.42■□□□□ 0.22
TIMD4Q96H15 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMD4Q96H15 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMD4Q96H15 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 NUDT16P1-203ENST00000513809 620 ntBASIC16.41■□□□□ 0.22
TIMD4Q96H15 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMD4Q96H15 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
TIMD4Q96H15 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 BX088651.1-201ENST00000540551 451 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 AL445675.2-201ENST00000620291 557 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 REXO1L12P-201ENST00000622156 912 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 AC131212.4-201ENST00000623606 975 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 TMEM179-206ENST00000616017 1645 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TIMD4Q96H15 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 AL512408.1-201ENST00000569378 2000 ntBASIC16.4■□□□□ 0.22
TIMD4Q96H15 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMD4Q96H15 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms