Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRUNE2Q8WUY3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRUNE2Q8WUY3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRUNE2Q8WUY3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
PRUNE2Q8WUY3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PRUNE2Q8WUY3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRUNE2Q8WUY3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRUNE2Q8WUY3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRUNE2Q8WUY3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 AC242852.2-201ENST00000615738 1807 ntBASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PRUNE2Q8WUY3 AC005229.4-201ENST00000610085 2198 ntBASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 AC012615.1-201ENST00000565797 1299 ntBASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRUNE2Q8WUY3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 NUS1P1-201ENST00000446295 882 ntBASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRUNE2Q8WUY3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 AC011498.5-201ENST00000592027 486 ntBASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 AC131212.4-201ENST00000623606 975 ntBASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRUNE2Q8WUY3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRUNE2Q8WUY3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms