Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.3■□□□□ 0.52
NUP43Q8NFH3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 UNC93B4-201ENST00000505679 747 ntBASIC18.29■□□□□ 0.52
NUP43Q8NFH3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP43Q8NFH3 AP006587.1-201ENST00000534129 1502 ntBASIC18.28■□□□□ 0.52
NUP43Q8NFH3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
NUP43Q8NFH3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NUP43Q8NFH3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NUP43Q8NFH3 AL121829.2-201ENST00000620908 328 ntBASIC18.27■□□□□ 0.52
NUP43Q8NFH3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP43Q8NFH3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUP43Q8NFH3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NUP43Q8NFH3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NUP43Q8NFH3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.26■□□□□ 0.51
NUP43Q8NFH3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 RNA5SP413-201ENST00000516373 109 ntBASIC18.26■□□□□ 0.51
NUP43Q8NFH3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUP43Q8NFH3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 Z82202.1-201ENST00000623446 1880 ntBASIC18.25■□□□□ 0.51
NUP43Q8NFH3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 YBX1P10-201ENST00000444752 975 ntBASIC18.25■□□□□ 0.51
NUP43Q8NFH3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.25■□□□□ 0.51
NUP43Q8NFH3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms