Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CFAP43Q8NDM7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CFAP43Q8NDM7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CFAP43Q8NDM7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CFAP43Q8NDM7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 AC010653.2-201ENST00000623505 997 ntBASIC30.68■■■□□ 2.5
CFAP43Q8NDM7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 RCC2P6-201ENST00000526625 1557 ntBASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 AL512408.1-201ENST00000569378 2000 ntBASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 TMEM179-206ENST00000616017 1645 ntBASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFAP43Q8NDM7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 AL671277.2-201ENST00000458060 996 ntBASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 AC141257.4-201ENST00000634557 245 ntBASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 AC136944.6-201ENST00000634818 245 ntBASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.66■■■□□ 2.5
CFAP43Q8NDM7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 AC007663.1-201ENST00000438948 1240 ntBASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 FEM1AP1-201ENST00000431297 1995 ntBASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFAP43Q8NDM7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC30.64■■■□□ 2.5
CFAP43Q8NDM7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 CCR12P-201ENST00000446203 998 ntBASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 AL162377.1-201ENST00000618844 1793 ntBASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.63■■■□□ 2.49
CFAP43Q8NDM7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFAP43Q8NDM7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms