Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 AC116351.2-201ENST00000606540 1585 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AC022898.2-201ENST00000616822 1312 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AC112907.2-201ENST00000448639 330 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 KRT18P31-201ENST00000506277 1292 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AL121672.3-201ENST00000608644 468 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 HLA-A-209ENST00000638375 975 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 HLA-A-201ENST00000376802 1334 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC168Q8NDH2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 AC016734.2-201ENST00000624325 1377 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 AC092597.1-201ENST00000487352 616 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 MRPL3P1-201ENST00000400109 1033 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 TSPY19P-201ENST00000418461 509 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 TSPY12P-201ENST00000421279 868 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 TSPY18P-201ENST00000441642 509 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 AC011498.5-201ENST00000592027 486 ntBASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC168Q8NDH2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 MIR1233-2-201ENST00000408138 82 ntBASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 MIR1233-1-201ENST00000408722 82 ntBASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 AF228730.7-201ENST00000641842 219 ntBASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 AC079781.3-201ENST00000449110 356 ntBASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 LINC01311-201ENST00000565162 1445 ntBASIC16.34■□□□□ 0.21
CCDC168Q8NDH2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms