Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.23■□□□□ 0.83
PHTF2Q8N3S3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 AC116351.2-201ENST00000606540 1585 ntBASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 AC020907.5-201ENST00000624372 1936 ntBASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 MMP23A-201ENST00000234610 1017 ntBASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 RCN1P1-201ENST00000400413 996 ntBASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
PHTF2Q8N3S3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 MIR1224-201ENST00000408193 85 ntBASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 KSR1P1-201ENST00000446298 240 ntBASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 AC116562.2-201ENST00000507042 360 ntBASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHTF2Q8N3S3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 KRT8P9-201ENST00000558927 1449 ntBASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 C1QL1P1-201ENST00000568105 661 ntBASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TFP1-202ENST00000475455 1573 ntBASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHTF2Q8N3S3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 CR392000.1-201ENST00000624770 1228 ntBASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHTF2Q8N3S3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 AP000525.1-201ENST00000608286 694 ntBASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 AC010331.1-201ENST00000611423 582 ntBASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 AC092720.2-201ENST00000602388 1665 ntBASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms