Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 AC073111.5-205ENST00000641717 521 ntBASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 MKRN4P-201ENST00000444706 1521 ntBASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 AC133552.2-202ENST00000575694 574 ntBASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 AC092437.1-201ENST00000624794 1048 ntBASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC50Q8IVM0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 AC105036.2-201ENST00000569468 176 ntBASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC50Q8IVM0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC50Q8IVM0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 MIR663A-201ENST00000385250 93 ntBASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AF201337.1-201ENST00000520239 748 ntBASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AL137784.2-201ENST00000607332 1000 ntBASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC50Q8IVM0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 BX276092.2-201ENST00000417668 665 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms