Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSMD2Q7Z408 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 TSPY12P-201ENST00000421279 868 ntBASIC16.54■□□□□ 0.24
CSMD2Q7Z408 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 NEK4P2-201ENST00000580004 1012 ntBASIC16.54■□□□□ 0.24
CSMD2Q7Z408 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 AC092329.2-201ENST00000598402 547 ntBASIC16.54■□□□□ 0.24
CSMD2Q7Z408 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.54■□□□□ 0.24
CSMD2Q7Z408 TFP1-202ENST00000475455 1573 ntBASIC16.54■□□□□ 0.24
CSMD2Q7Z408 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 KRT18P1-202ENST00000452408 1331 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AC004951.3-201ENST00000418645 1148 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 LINC02084-201ENST00000606069 1096 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AP002383.4-201ENST00000442518 975 ntBASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CSMD2Q7Z408 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CSMD2Q7Z408 IFNL4P1-201ENST00000607083 540 ntBASIC16.52■□□□□ 0.24
CSMD2Q7Z408 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.52■□□□□ 0.23
CSMD2Q7Z408 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 EP400NL-214ENST00000641289 2402 ntBASIC16.51■□□□□ 0.23
CSMD2Q7Z408 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 LINC01311-201ENST00000565162 1445 ntBASIC16.51■□□□□ 0.23
CSMD2Q7Z408 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms