Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 KRT8P20-201ENST00000423953 1409 ntBASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
CDHR3Q6ZTQ4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 LINC01465-201ENST00000408887 1940 ntBASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDHR3Q6ZTQ4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 AC105020.6-201ENST00000621523 1217 ntBASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDHR3Q6ZTQ4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDHR3Q6ZTQ4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDHR3Q6ZTQ4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDHR3Q6ZTQ4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDHR3Q6ZTQ4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDHR3Q6ZTQ4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.57■□□□□ 0.72
CDHR3Q6ZTQ4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDHR3Q6ZTQ4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms