Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 AC007322.3-201ENST00000426526 701 ntBASIC12.39□□□□□ -0.43
LINC00575Q6W349 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 OR6D1P-202ENST00000641007 5290 ntBASIC12.39□□□□□ -0.43
LINC00575Q6W349 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 BICD1-207ENST00000551848 1962 ntBASIC12.39□□□□□ -0.43
LINC00575Q6W349 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00575Q6W349 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00575Q6W349 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 NOC2LP1-202ENST00000452600 2235 ntBASIC12.38□□□□□ -0.43
LINC00575Q6W349 KRT16P6-202ENST00000425692 1426 ntBASIC12.38□□□□□ -0.43
LINC00575Q6W349 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC00575Q6W349 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PKD1P1-201ENST00000458669 6805 ntBASIC12.38□□□□□ -0.43
LINC00575Q6W349 AL354751.1-201ENST00000412768 1863 ntBASIC12.38□□□□□ -0.43
LINC00575Q6W349 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00575Q6W349 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 AC138907.5-202ENST00000569484 235 ntBASIC12.37□□□□□ -0.43
LINC00575Q6W349 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00575Q6W349 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC00575Q6W349 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00575Q6W349 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00575Q6W349 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC00575Q6W349 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
LINC00575Q6W349 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00575Q6W349 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms