Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
RNF220Q5VTB9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 FAM21FP-204ENST00000608637 956 ntBASIC18.77■□□□□ 0.6
RNF220Q5VTB9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF220Q5VTB9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF220Q5VTB9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RNF220Q5VTB9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 AC010536.3-201ENST00000620306 533 ntBASIC18.76■□□□□ 0.59
RNF220Q5VTB9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 AC068880.1-201ENST00000507289 2297 ntBASIC18.76■□□□□ 0.59
RNF220Q5VTB9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF220Q5VTB9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 KRT8P36-201ENST00000489121 1440 ntBASIC18.75■□□□□ 0.59
RNF220Q5VTB9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 TERF1P5-201ENST00000477545 1207 ntBASIC18.75■□□□□ 0.59
RNF220Q5VTB9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RNF220Q5VTB9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 AC007322.4-201ENST00000509611 723 ntBASIC18.74■□□□□ 0.59
RNF220Q5VTB9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.74■□□□□ 0.59
RNF220Q5VTB9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF220Q5VTB9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 KRT18P5-201ENST00000436075 1291 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms