Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM27BQ5VT28 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TUBB8P6-201ENST00000436895 1288 ntBASIC17.12■□□□□ 0.33
FAM27BQ5VT28 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM27BQ5VT28 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.11■□□□□ 0.33
FAM27BQ5VT28 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 NBPF21P-201ENST00000425093 1451 ntBASIC17.11■□□□□ 0.33
FAM27BQ5VT28 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM27BQ5VT28 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 AC005332.7-201ENST00000614046 2005 ntBASIC17.1■□□□□ 0.33
FAM27BQ5VT28 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 AC233263.1-201ENST00000578059 224 ntBASIC17.1■□□□□ 0.33
FAM27BQ5VT28 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM27BQ5VT28 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM27BQ5VT28 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM27BQ5VT28 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms