Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 HTR5BP-201ENST00000430851 1154 ntBASIC19.06■□□□□ 0.64
RIF1Q5UIP0 AP000867.3-201ENST00000524675 377 ntBASIC19.06■□□□□ 0.64
RIF1Q5UIP0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RIF1Q5UIP0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 AP002414.4-201ENST00000589764 1148 ntBASIC19.05■□□□□ 0.64
RIF1Q5UIP0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RIF1Q5UIP0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 MIR564-202ENST00000385049 94 ntBASIC19.04■□□□□ 0.64
RIF1Q5UIP0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 TERC-201ENST00000602385 541 ntBASIC19.04■□□□□ 0.64
RIF1Q5UIP0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RIF1Q5UIP0 KRT8P20-201ENST00000423953 1409 ntBASIC19.04■□□□□ 0.64
RIF1Q5UIP0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.03■□□□□ 0.64
RIF1Q5UIP0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 AL162741.1-201ENST00000565563 1558 ntBASIC19.03■□□□□ 0.64
RIF1Q5UIP0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.03■□□□□ 0.64
RIF1Q5UIP0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 HLA-F-220ENST00000434407 884 ntBASIC19.02■□□□□ 0.64
RIF1Q5UIP0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 AP001160.2-201ENST00000596071 487 ntBASIC19.02■□□□□ 0.64
RIF1Q5UIP0 AL121772.3-201ENST00000610840 674 ntBASIC19.02■□□□□ 0.64
RIF1Q5UIP0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 AL031284.1-201ENST00000419297 478 ntBASIC19.02■□□□□ 0.64
RIF1Q5UIP0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RIF1Q5UIP0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.02■□□□□ 0.63
RIF1Q5UIP0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RIF1Q5UIP0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RIF1Q5UIP0 PMS2P7-201ENST00000506558 1336 ntBASIC19.02■□□□□ 0.63
RIF1Q5UIP0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RIF1Q5UIP0 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms