Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
HMGXB3Q12766 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
HMGXB3Q12766 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
HMGXB3Q12766 PPIH-202ENST00000372549 327 ntTSL 3 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 AL845331.1-201ENST00000424978 1190 ntBASIC34.6■■■■□ 3.13
HMGXB3Q12766 AP002383.4-201ENST00000442518 975 ntBASIC34.6■■■■□ 3.13
HMGXB3Q12766 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
HMGXB3Q12766 AC092329.2-201ENST00000598402 547 ntBASIC34.6■■■■□ 3.13
HMGXB3Q12766 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC34.6■■■■□ 3.13
HMGXB3Q12766 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC34.59■■■■□ 3.13
HMGXB3Q12766 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC34.59■■■■□ 3.13
HMGXB3Q12766 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
HMGXB3Q12766 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC34.59■■■■□ 3.13
HMGXB3Q12766 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
HMGXB3Q12766 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
HMGXB3Q12766 KRT18P1-202ENST00000452408 1331 ntBASIC34.59■■■■□ 3.13
HMGXB3Q12766 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
HMGXB3Q12766 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
HMGXB3Q12766 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC34.59■■■■□ 3.13
HMGXB3Q12766 CD37-204ENST00000535669 1674 ntTSL 2 BASIC34.58■■■■□ 3.13
HMGXB3Q12766 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
HMGXB3Q12766 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
HMGXB3Q12766 CALM1-205ENST00000553542 877 ntTSL 5 BASIC34.58■■■■□ 3.13
HMGXB3Q12766 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC34.58■■■■□ 3.13
HMGXB3Q12766 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
HMGXB3Q12766 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
HMGXB3Q12766 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
HMGXB3Q12766 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
HMGXB3Q12766 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC34.57■■■■□ 3.12
HMGXB3Q12766 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC34.57■■■■□ 3.12
HMGXB3Q12766 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC34.57■■■■□ 3.12
HMGXB3Q12766 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
HMGXB3Q12766 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
HMGXB3Q12766 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
HMGXB3Q12766 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC34.56■■■■□ 3.12
HMGXB3Q12766 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
HMGXB3Q12766 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC34.56■■■■□ 3.12
HMGXB3Q12766 AC104692.2-201ENST00000603054 253 ntBASIC34.56■■■■□ 3.12
HMGXB3Q12766 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC34.56■■■■□ 3.12
HMGXB3Q12766 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
HMGXB3Q12766 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
HMGXB3Q12766 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
HMGXB3Q12766 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC34.55■■■■□ 3.12
HMGXB3Q12766 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
HMGXB3Q12766 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
HMGXB3Q12766 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
HMGXB3Q12766 TSSC2-201ENST00000450217 709 ntBASIC34.55■■■■□ 3.12
HMGXB3Q12766 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
HMGXB3Q12766 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 AC106795.1-205ENST00000512851 1056 ntBASIC34.54■■■■□ 3.12
HMGXB3Q12766 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC34.54■■■■□ 3.12
HMGXB3Q12766 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
HMGXB3Q12766 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
HMGXB3Q12766 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
HMGXB3Q12766 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC34.53■■■■□ 3.12
HMGXB3Q12766 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC34.53■■■■□ 3.12
HMGXB3Q12766 AL671883.3-201ENST00000603274 991 ntBASIC34.53■■■■□ 3.12
HMGXB3Q12766 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC34.53■■■■□ 3.12
HMGXB3Q12766 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
HMGXB3Q12766 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
HMGXB3Q12766 GALC-202ENST00000393568 2054 ntTSL 2 BASIC34.52■■■■□ 3.12
HMGXB3Q12766 AC016734.2-201ENST00000624325 1377 ntBASIC34.52■■■■□ 3.12
HMGXB3Q12766 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
HMGXB3Q12766 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC34.52■■■■□ 3.12
HMGXB3Q12766 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC34.52■■■■□ 3.12
HMGXB3Q12766 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC34.52■■■■□ 3.12
HMGXB3Q12766 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
HMGXB3Q12766 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
HMGXB3Q12766 AC079781.3-201ENST00000449110 356 ntBASIC34.51■■■■□ 3.12
HMGXB3Q12766 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC34.51■■■■□ 3.12
HMGXB3Q12766 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
HMGXB3Q12766 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
HMGXB3Q12766 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC34.51■■■■□ 3.11
HMGXB3Q12766 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC34.51■■■■□ 3.11
HMGXB3Q12766 AP000593.1-201ENST00000393668 712 ntBASIC34.5■■■■□ 3.11
HMGXB3Q12766 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC34.5■■■■□ 3.11
HMGXB3Q12766 SLC25A6P4-201ENST00000586535 553 ntBASIC34.5■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms