Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.06■□□□□ 0.32
SEC61A1P61619 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SEC61A1P61619 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.06■□□□□ 0.32
SEC61A1P61619 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.06■□□□□ 0.32
SEC61A1P61619 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SEC61A1P61619 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC61A1P61619 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SEC61A1P61619 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.05■□□□□ 0.32
SEC61A1P61619 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.05■□□□□ 0.32
SEC61A1P61619 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SEC61A1P61619 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC61A1P61619 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SEC61A1P61619 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC61A1P61619 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SEC61A1P61619 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.04■□□□□ 0.32
SEC61A1P61619 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SEC61A1P61619 KRT18P68-201ENST00000392293 1000 ntBASIC17.04■□□□□ 0.32
SEC61A1P61619 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.04■□□□□ 0.32
SEC61A1P61619 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.04■□□□□ 0.32
SEC61A1P61619 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.04■□□□□ 0.32
SEC61A1P61619 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SEC61A1P61619 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.04■□□□□ 0.32
SEC61A1P61619 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
SEC61A1P61619 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SEC61A1P61619 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SEC61A1P61619 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC61A1P61619 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC61A1P61619 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SEC61A1P61619 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.03■□□□□ 0.32
SEC61A1P61619 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC61A1P61619 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SEC61A1P61619 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.03■□□□□ 0.32
SEC61A1P61619 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 AL589743.5-201ENST00000616611 1050 ntBASIC17.03■□□□□ 0.32
SEC61A1P61619 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC61A1P61619 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms