Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FAM201B-201ENST00000458407 597 ntBASIC17.87■□□□□ 0.45
CDH11P55287 AC097658.1-201ENST00000475555 843 ntBASIC17.87■□□□□ 0.45
CDH11P55287 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH11P55287 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDH11P55287 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDH11P55287 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH11P55287 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 LSM12P1-201ENST00000411836 588 ntBASIC17.86■□□□□ 0.45
CDH11P55287 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH11P55287 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH11P55287 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.86■□□□□ 0.45
CDH11P55287 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH11P55287 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH11P55287 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH11P55287 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 DUSP5P2-201ENST00000426873 1033 ntBASIC17.85■□□□□ 0.45
CDH11P55287 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH11P55287 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH11P55287 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH11P55287 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH11P55287 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH11P55287 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH11P55287 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDH11P55287 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH11P55287 AC020763.4-201ENST00000623414 4170 ntBASIC17.84■□□□□ 0.45
CDH11P55287 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 AC091874.3-201ENST00000512672 1195 ntBASIC17.84■□□□□ 0.45
CDH11P55287 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.84■□□□□ 0.45
CDH11P55287 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 AC083880.1-201ENST00000608266 535 ntBASIC17.84■□□□□ 0.45
CDH11P55287 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH11P55287 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH11P55287 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH11P55287 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH11P55287 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH11P55287 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms