Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 AP005212.1-201ENST00000581547 1997 ntBASIC20.45■□□□□ 0.86
EPHB3P54753 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 TERF1P1-201ENST00000311003 1181 ntBASIC20.44■□□□□ 0.86
EPHB3P54753 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB3P54753 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 KRT18P57-201ENST00000443599 1254 ntBASIC20.44■□□□□ 0.86
EPHB3P54753 AC128688.1-201ENST00000487626 519 ntBASIC20.44■□□□□ 0.86
EPHB3P54753 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB3P54753 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
EPHB3P54753 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.44■□□□□ 0.86
EPHB3P54753 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
EPHB3P54753 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB3P54753 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
EPHB3P54753 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.43■□□□□ 0.86
EPHB3P54753 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB3P54753 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
EPHB3P54753 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 AL512408.1-201ENST00000569378 2000 ntBASIC20.43■□□□□ 0.86
EPHB3P54753 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.43■□□□□ 0.86
EPHB3P54753 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EPHB3P54753 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB3P54753 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB3P54753 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 LIN28AP1-201ENST00000429574 405 ntBASIC20.43■□□□□ 0.86
EPHB3P54753 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
EPHB3P54753 AC008040.2-201ENST00000461049 708 ntBASIC20.43■□□□□ 0.86
EPHB3P54753 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB3P54753 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
EPHB3P54753 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
EPHB3P54753 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB3P54753 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EPHB3P54753 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
EPHB3P54753 FEM1AP1-201ENST00000431297 1995 ntBASIC20.43■□□□□ 0.86
EPHB3P54753 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB3P54753 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB3P54753 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EPHB3P54753 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB3P54753 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB3P54753 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB3P54753 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB3P54753 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB3P54753 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.42■□□□□ 0.86
EPHB3P54753 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB3P54753 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EPHB3P54753 AL160286.2-201ENST00000567150 934 ntBASIC20.42■□□□□ 0.86
EPHB3P54753 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
EPHB3P54753 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB3P54753 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.41■□□□□ 0.86
EPHB3P54753 MFAP1P1-201ENST00000442257 1255 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 ECEL1P2-202ENST00000465689 757 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 AC091390.4-202ENST00000476426 537 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 Z85996.1-201ENST00000494644 937 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.41■□□□□ 0.86
EPHB3P54753 AL590326.2-201ENST00000625139 305 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB3P54753 AIRN-201ENST00000601203 4374 ntBASIC20.41■□□□□ 0.86
EPHB3P54753 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB3P54753 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB3P54753 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB3P54753 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB3P54753 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHB3P54753 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
EPHB3P54753 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
EPHB3P54753 ATP5G1P1-201ENST00000448724 379 ntBASIC20.4■□□□□ 0.86
EPHB3P54753 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB3P54753 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
EPHB3P54753 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.4■□□□□ 0.86
EPHB3P54753 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHB3P54753 AC009237.14-201ENST00000609975 1594 ntBASIC20.4■□□□□ 0.86
EPHB3P54753 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
EPHB3P54753 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
EPHB3P54753 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.86
EPHB3P54753 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EPHB3P54753 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.39■□□□□ 0.86
EPHB3P54753 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB3P54753 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms