Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CENPAP49450 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPAP49450 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPAP49450 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.7■□□□□ 0.42
CENPAP49450 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPAP49450 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CENPAP49450 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPAP49450 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPAP49450 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPAP49450 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CENPAP49450 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 LSM12P1-201ENST00000411836 588 ntBASIC17.69■□□□□ 0.42
CENPAP49450 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPAP49450 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 AC093787.1-201ENST00000450396 207 ntBASIC17.69■□□□□ 0.42
CENPAP49450 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPAP49450 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.69■□□□□ 0.42
CENPAP49450 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 AC080038.1-201ENST00000611274 1154 ntBASIC17.69■□□□□ 0.42
CENPAP49450 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPAP49450 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CENPAP49450 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPAP49450 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CENPAP49450 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 MIR935-201ENST00000401179 91 ntBASIC17.68■□□□□ 0.42
CENPAP49450 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPAP49450 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.68■□□□□ 0.42
CENPAP49450 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 IKBKGP1-201ENST00000612193 1073 ntBASIC17.68■□□□□ 0.42
CENPAP49450 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CENPAP49450 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CENPAP49450 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.67■□□□□ 0.42
CENPAP49450 AL137784.2-201ENST00000607332 1000 ntBASIC17.67■□□□□ 0.42
CENPAP49450 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.67■□□□□ 0.42
CENPAP49450 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CENPAP49450 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CENPAP49450 KRT17P1-201ENST00000399211 1546 ntBASIC17.67■□□□□ 0.42
CENPAP49450 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CENPAP49450 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
CENPAP49450 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 BX323043.1-201ENST00000641006 1765 ntBASIC17.66■□□□□ 0.42
CENPAP49450 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.66■□□□□ 0.42
CENPAP49450 AC087289.5-201ENST00000586076 3175 ntBASIC17.66■□□□□ 0.42
CENPAP49450 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 AC023632.3-201ENST00000521633 145 ntBASIC17.66■□□□□ 0.42
CENPAP49450 C2orf69P4-201ENST00000565394 541 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms