Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 VENTXP5-201ENST00000523979 775 ntBASIC24.65■■□□□ 1.54
RFC4P35249 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.65■■□□□ 1.54
RFC4P35249 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.65■■□□□ 1.54
RFC4P35249 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.65■■□□□ 1.54
RFC4P35249 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.65■■□□□ 1.54
RFC4P35249 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.65■■□□□ 1.54
RFC4P35249 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.65■■□□□ 1.54
RFC4P35249 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.65■■□□□ 1.54
RFC4P35249 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.64■■□□□ 1.54
RFC4P35249 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.64■■□□□ 1.54
RFC4P35249 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RFC4P35249 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.64■■□□□ 1.54
RFC4P35249 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.64■■□□□ 1.54
RFC4P35249 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.64■■□□□ 1.54
RFC4P35249 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.64■■□□□ 1.54
RFC4P35249 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
RFC4P35249 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.64■■□□□ 1.53
RFC4P35249 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RFC4P35249 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RFC4P35249 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RFC4P35249 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RFC4P35249 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RFC4P35249 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFC4P35249 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFC4P35249 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.63■■□□□ 1.53
RFC4P35249 AL136038.3-201ENST00000561909 1096 ntBASIC24.63■■□□□ 1.53
RFC4P35249 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFC4P35249 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.63■■□□□ 1.53
RFC4P35249 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RFC4P35249 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFC4P35249 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFC4P35249 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
RFC4P35249 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RFC4P35249 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RFC4P35249 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RFC4P35249 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.62■■□□□ 1.53
RFC4P35249 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.62■■□□□ 1.53
RFC4P35249 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.62■■□□□ 1.53
RFC4P35249 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RFC4P35249 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.62■■□□□ 1.53
RFC4P35249 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RFC4P35249 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RFC4P35249 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
RFC4P35249 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RFC4P35249 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 KRT8P45-201ENST00000414328 1447 ntBASIC24.61■■□□□ 1.53
RFC4P35249 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.61■■□□□ 1.53
RFC4P35249 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.61■■□□□ 1.53
RFC4P35249 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.61■■□□□ 1.53
RFC4P35249 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.61■■□□□ 1.53
RFC4P35249 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.61■■□□□ 1.53
RFC4P35249 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RFC4P35249 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RFC4P35249 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.6■■□□□ 1.53
RFC4P35249 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 EP400NL-214ENST00000641289 2402 ntBASIC24.6■■□□□ 1.53
RFC4P35249 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 CKBP1-201ENST00000565489 1086 ntBASIC24.6■■□□□ 1.53
RFC4P35249 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.6■■□□□ 1.53
RFC4P35249 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.6■■□□□ 1.53
RFC4P35249 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
RFC4P35249 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.6■■□□□ 1.53
RFC4P35249 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RFC4P35249 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFC4P35249 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.59■■□□□ 1.53
RFC4P35249 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFC4P35249 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms